RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SUN2Q9UH99 717 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 PCDHGC3Q9UN70 934 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 NME7Q9Y5B8 376 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 PCDHGA8Q9Y5G5 932 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 MYO9AB2RTY4 2548 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 COL12A1Q99715 3063 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 PTPRJQ12913 1337 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 GOLGA8IPA6NC78 632 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 GOLGA8JA6NMD2 632 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 CDRT15L2A8MXV6 281 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TLR4O00206 839 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 SCAMP3O14828 347 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 LATO43561 262 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 STC2O76061 302 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TNNC2P02585 160 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 WNT1P04628 370 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 EPHX1P07099 455 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 KRT19P08727 400 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TMEM191BP0C7N4 346 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 GAP43P17677 238 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 PRKCHP24723 683 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 GALCP54803 685 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 NXPH1P58417 271 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 RABEP1Q15276 862 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TTC31Q49AM3 519 aaPredicted RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 SLC45A4Q5BKX6 768 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TMEM215Q68D42 235 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 FAM173BQ6P4H8 233 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TRAPPC11Q7Z392 1133 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 ADAT2Q7Z6V5 191 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 CLEC14AQ86T13 490 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 GATAD2AQ86YP4 633 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 CRYBG2Q8N1P7 616 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 EID2Q8N6I1 236 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 EXD3Q8N9H8 876 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 OR2T34Q8NGX1 318 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 SCAMP5Q8TAC9 235 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 PRR7Q8TB68 274 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 LARP4BQ92615 738 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 FAM131CQ96AQ9 280 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 DNAJC19Q96DA6 116 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 P2RY11Q96G91 374 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 SMARCD1Q96GM5 515 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 PSMG3-AS1Q96PY0 264 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 KCNK16Q96T55 309 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 SRRTQ9BXP5 876 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 TRIM9Q9C026 710 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 FAM117AQ9C073 453 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 MTMR12Q9C0I1 747 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 RSPH9Q9H1X1 276 aaPredicted RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 KDM4CQ9H3R0 1056 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 PDE11AQ9HCR9 933 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.3□□□□□ -1.4
GYPB-204ENST00000504951 SEPT3Q9UH03 358 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 STOML2Q9UJZ1 356 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 FZD4Q9ULV1 537 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 PLA2G4CQ9UP65 541 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 HEMK1Q9Y5R4 338 aaPredicted RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 CLIC4Q9Y696 253 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 LRRK2Q5S007 2527 aa6.3□□□□□ -1.4
GYPB-204ENST00000504951 TLN1Q9Y490 2541 aaKnown RBP6.3□□□□□ -1.4
GYPB-204ENST00000504951 FLNCQ14315 2725 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 A0A087X0B3 334 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 FRMD3A2A2Y4 597 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 LRRC72A6NJI9 287 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 ZNF233A6NK53 670 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 KLK10O43240 276 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 OPA1O60313 960 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 EIF5BO60841 1220 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 RNGTTO60942 597 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 TBX18O95935 607 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 CST3P01034 146 aaPredicted RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 KLKB1P03952 638 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 DNTTP04053 509 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 CKMT1AP12532 417 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 CR2P20023 1033 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 LONP1P36776 959 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 SNRPFP62306 86 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 SGO2Q562F6 1265 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 MPP7Q5T2T1 576 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 SERPINA13PQ6UXR4 307 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 FUKQ8N0W3 1084 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 GPD1LQ8N335 351 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 ZNF557Q8N988 423 aaPredicted RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 ZMIZ2Q8NF64 920 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 OR5B17Q8NGF7 314 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 OR6B3Q8NGW1 331 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 TPCN2Q8NHX9 752 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 SNX19Q92543 992 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms