RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KIAA1257Q9ULG3 409 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 SLC6A14Q9UN76 642 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 NAALADL1Q9UQQ1 740 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 HBS1LQ9Y450 684 aaKnown RBP13.69□□□□□ -0.22
DDX41-204ENST00000504807 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDX41-204ENST00000504807 SLCO1B1Q9Y6L6 691 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
DDX41-204ENST00000504807 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 PAPSS1O43252 624 aaPredicted RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 LTFP02788 710 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 CD70P32970 193 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 CHKAP35790 457 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 SLC8A3P57103 927 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 RPL6Q02878 288 aaKnown RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 TAF5Q15542 800 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 PTPRNQ16849 979 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 TRIM65Q6PJ69 517 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 KIAA0907Q7Z7F0 614 aaPredicted RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 ADIPOR2Q86V24 386 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 CYB5D2Q8WUJ1 264 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 SPACA7Q96KW9 195 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 CLMPQ9H6B4 373 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 ABCC13Q9NSE7 274 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 ELOVL2Q9NXB9 296 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 DKK4Q9UBT3 224 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 APOBEC2Q9Y235 224 aaKnown RBP13.68□□□□□ -0.22
DDX41-204ENST00000504807 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
DDX41-204ENST00000504807 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 FAM170AA1A519 330 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 NCAM1P13591 858 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 MAOBP27338 520 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 ITPKBP27987 946 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 PPP1R2P41236 205 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 UBE2HP62256 183 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 ZNF33AQ06730 810 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 DUOXA1Q1HG43 343 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
DDX41-204ENST00000504807 KIAA1324Q6UXG2 1013 aaKnown RBP13.67□□□□□ -0.22
DDX41-204ENST00000504807 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 TAC4Q86UU9 113 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 MYO19Q96H55 970 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 HSPA12BQ96MM6 686 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
DDX41-204ENST00000504807 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 USP36Q9P275 1121 aaKnown RBP13.67□□□□□ -0.22
DDX41-204ENST00000504807 RWDD2AQ9UIY3 292 aa13.67□□□□□ -0.22
DDX41-204ENST00000504807 INTS6Q9UL03 887 aaKnown RBP13.67□□□□□ -0.22
DDX41-204ENST00000504807 PLXNB3Q9ULL4 1909 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 CKAP5Q14008 2032 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 TRABD2BA6NFA1 517 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 E5RJQ4 531 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 KRT5P13647 590 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 NUMBP49757 651 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 MPPE1Q53F39 396 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 FSCBQ5H9T9 825 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 ADGRF1Q5T601 910 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 PIK3R6Q5UE93 754 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 MMS22LQ6ZRQ5 1243 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX41-204ENST00000504807 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 CIPCQ9C0C6 399 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 NUCKS1Q9H1E3 243 aaKnown RBP13.66□□□□□ -0.22
DDX41-204ENST00000504807 TMEM245Q9H330 911 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
DDX41-204ENST00000504807 ARHGAP33O14559 1287 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 CAPN9O14815 690 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 ACSL4O60488 711 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 TBL1XO60907 577 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
DDX41-204ENST00000504807 GNA14O95837 355 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 IGLV3-25P01717 112 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 CYBBP04839 570 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 SERPINF2P08697 491 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 PON1P27169 355 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 DPP6P42658 865 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 HARS2P49590 506 aaKnown RBP13.65□□□□□ -0.22
DDX41-204ENST00000504807 TPMTP51580 245 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 TBX4P57082 545 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
DDX41-204ENST00000504807 CFHR1Q03591 330 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 EIF4EBP2Q13542 120 aaPredicted RBP13.65□□□□□ -0.22
DDX41-204ENST00000504807 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.22
DDX41-204ENST00000504807 MIIPQ5JXC2 388 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms