RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PRUNE1Q86TP1 453 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ITIH5Q86UX2 942 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 NLRP14Q86W24 1093 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 MIB1Q86YT6 1006 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 MAP7D3Q8IWC1 876 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ARHGAP12Q8IWW6 846 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 GSPT2Q8IYD1 628 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 ALLCQ8N6M5 410 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 NETO2Q8NC67 525 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 RIN3Q8TB24 985 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 RUBCNQ92622 972 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 TCEAL4Q96EI5 215 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 C1orf74Q96LT6 269 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ZNF512Q96ME7 567 aaPredicted RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 HINFPQ9BQA5 517 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 NOL6Q9H6R4 1146 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 UXTQ9UBK9 157 aaPredicted RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 OR12D3Q9UGF7 316 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 DNMT3LQ9UJW3 386 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 DRG1Q9Y295 367 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 FAM187AA6NFU0 413 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 WASH4PA8MWX3 477 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 CREB3O43889 395 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 MAP3K6O95382 1288 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 MOCS2O96007 188 aaPredicted RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 LRG1P02750 347 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 ITGAVP06756 1048 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM3-217ENST00000504663 ETS1P14921 441 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 VAV1P15498 845 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 GJA1P17302 382 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 ERCC2P18074 760 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 SLC6A4P31645 630 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 PPP3CCP48454 512 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 ZNF135P52742 658 aaPredicted RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 MLLT6P55198 1093 aaPredicted RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 SLC7A9P82251 487 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 BYSLQ13895 437 aaKnown RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 PPM1LQ5SGD2 360 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 AFMIDQ63HM1 303 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 C1orf228Q6PIY5 440 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 Q6ZNB5 142 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 B4GALNT4Q76KP1 1039 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM3-217ENST00000504663 DDX42Q86XP3 938 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM3-217ENST00000504663 LRRN4Q8WUT4 740 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 IGSF8Q969P0 613 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 RTP4Q96DX8 246 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 PRICKLE1Q96MT3 831 aaPredicted RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM3-217ENST00000504663 CDK5RAP1Q96SZ6 601 aaKnown RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 FRMD8P1Q9BZ68 369 aaPredicted RBP10.73□□□□□ -0.69
TPM3-217ENST00000504663 PRDM16Q9HAZ2 1276 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 USP29Q9HBJ7 922 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 GKN1Q9NS71 199 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 ZDHHC18Q9NUE0 388 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 NDFIP2Q9NV92 336 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 TMEM51Q9NW97 253 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 MSRAQ9UJ68 235 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 STOML2Q9UJZ1 356 aa10.73□□□□□ -0.69
TPM3-217ENST00000504663 NUP205Q92621 2012 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 GOLGA6L7A0A1B0GV03 622 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 A0A1W2PRU2 124 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 DRGXA6NNA5 263 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 E9PAM4 449 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 HMBSP08397 361 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 HTR7P34969 479 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 ATP5C1P36542 298 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 ARL4AP40617 200 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 CETN2P41208 172 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 RPL21P46778 160 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 CARSP49589 748 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 SGSHP51688 502 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 CLCN6P51797 869 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 TPI1P60174 286 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 NTHL1P78549 312 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 GUCY2DQ02846 1103 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 AUHQ13825 339 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 ARL13BQ3SXY8 428 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 ALFQ53S48 1182 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 RAP1GAP2Q684P5 730 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 TXNDC8Q6A555 127 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 FBXL22Q6P050 247 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 RHBDF2Q6PJF5 856 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 RBM23Q86U06 439 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 UNC45BQ8IWX7 931 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 FAM217AQ8IXS0 508 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 ATL2Q8NHH9 583 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 ZSCAN18Q8TBC5 510 aaPredicted RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 MICAL1Q8TDZ2 1067 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 AENQ8WTP8 325 aaKnown RBP10.72□□□□□ -0.69
TPM3-217ENST00000504663 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 PLD4Q96BZ4 506 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 TIFAQ96CG3 184 aa10.72□□□□□ -0.69
TPM3-217ENST00000504663 MRPL38Q96DV4 380 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms