RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KRT84Q9NSB2 600 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 GAKO14976 1311 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 SIGLEC1Q9BZZ2 1709 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP3A7-CYP3A51PA0A087WV96 503 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 A0A1B0GW55 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 RAD51BO15315 384 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L2P0CJ85 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L3P0CJ86 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L4P0CJ87 422 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L5P0CJ88 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L6P0CJ89 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4L7P0CJ90 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP3A7P24462 503 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ALDH6A1Q02252 535 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 KYAT3Q6YP21 454 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PHF21BQ96EK2 531 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DUX4Q9UBX2 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 UMODL1Q5DID0 1318 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PSMD10O75832 226 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ZCCHC18P0CG32 403 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PSMA3P25788 255 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 YWHAQP27348 245 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ADORA2AP29274 412 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PBLDP30039 288 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC16A1P53985 500 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 TBCELQ5QJ74 424 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ZNF470Q6ECI4 717 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 TFAP2DQ7Z6R9 452 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC44A2Q8IWA5 706 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 B3GALNT2Q8NCR0 500 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 C10orf88Q9H8K7 445 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 UTP6Q9NYH9 597 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ZBTB22O15209 634 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PCNAP12004 261 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 AKR1A1P14550 325 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC2A4P14672 509 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 KDELR1P24390 212 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 TLK2Q86UE8 772 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ZSWIM2Q8NEG5 633 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 DPY30Q9C005 99 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CHST7Q9NS84 486 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CROTQ9UKG9 612 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 E5RJQ4 531 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 VPS4BO75351 444 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP1A1P04798 512 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP2A7P20853 494 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 FASP25445 335 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 SOX6P35712 828 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 CCT8P50990 548 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PLD1Q13393 1074 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 LRRC38Q5VT99 294 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 ZNF75CPQ92670 426 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 MMADHCQ9H3L0 296 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.29
PCDHA1-203ENST00000504120 VAPBO95292 243 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CLPTM1O96005 669 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 TNFRSF8P28908 595 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 GTF2BQ00403 316 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 TGM3Q08188 693 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PPP3CAQ08209 521 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 UNC93AQ86WB7 457 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 RSPH1Q8WYR4 309 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 ELMO3Q96BJ8 720 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 ASB2Q96Q27 587 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 RBAK-RBAKDNI3L0D1 243 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 OASLQ15646 514 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PARP6Q2NL67 630 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 MIER2Q8N344 545 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 LRRN4CLQ8ND94 238 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PRRG3Q9BZD7 231 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CIPCQ9C0C6 399 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PAIP2BQ9ULR5 123 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 SAC3D1A6NKF1 404 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CCNT2O60583 730 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PSEN2P49810 448 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM98BQ52LJ0 330 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CCDC92Q53HC0 331 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 NDUFAF1Q9Y375 327 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 SIGLEC16A6NMB1 481 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 BTNL10A8MVZ5 291 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 F8VP50 259 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP1A2P05177 515 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 ANKS6Q68DC2 871 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 OR56A4Q8NGH8 313 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 OSCP1Q8WVF1 389 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms