RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ATXN2Q99700 1313 aaKnown RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 SYPP08247 313 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 PABPC1P11940 636 aaKnown RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 KRT9P35527 623 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 TPMTP51580 245 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 BPIFB4P59827 614 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 NNTQ13423 1086 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 CACNA1EQ15878 2313 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 VWA3BQ502W6 1294 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 FNDC3BQ53EP0 1204 aaKnown RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 EFHC1Q5JVL4 640 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 MBLAC2Q68D91 279 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 GJB7Q6PEY0 223 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 KIAA0907Q7Z7F0 614 aaPredicted RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 PIP4P1Q86T03 277 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 CADM4Q8NFZ8 388 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 DQX1Q8TE96 717 aaKnown RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 TOE1Q96GM8 510 aaKnown RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 PPP1R13BQ96KQ4 1090 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 HSPA12BQ96MM6 686 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 GPR174Q9BXC1 333 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 LHX5Q9H2C1 402 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 ACP6Q9NPH0 428 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
MED28-203ENST00000503945 WSB2Q9NYS7 404 aaPredicted RBP12.41□□□□□ -0.42
MED28-203ENST00000503945 DNAJC12Q9UKB3 198 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 ZZEF1O43149 2961 aa12.41□□□□□ -0.42
MED28-203ENST00000503945 ASPMQ8IZT6 3477 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SPAARA0A1B0GVQ0 90 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SRRM3A6NNA2 597 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 E5RJQ4 531 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 FOXN3O00409 490 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 HYAL3O43820 417 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 TRUB2O95900 331 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 APOEP02649 317 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 GLI1P08151 1106 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 DLDP09622 509 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 SLC2A3P11169 496 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 SLC6A4P31645 630 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 ST8SIA6P61647 398 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 CDK17Q00537 523 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SEMA3BQ13214 749 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 MAN2A1Q16706 1144 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 DCAF6Q58WW2 860 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 ZC3H12AQ5D1E8 599 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 CT47A1Q5JQC4 288 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 SLC41A1Q8IVJ1 513 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 MFN1Q8IWA4 741 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 CARNMT1Q8N4J0 409 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 HDDC3Q8N4P3 179 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
MED28-203ENST00000503945 HJURPQ8NCD3 748 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 OR2T3Q8NH03 318 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 CYB5D2Q8WUJ1 264 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 RNF34Q969K3 372 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SLC39A13Q96H72 371 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 FCRL2Q96LA5 508 aaPredicted RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 TUBGCP2Q9BSJ2 902 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 GTPBP2Q9BX10 602 aaKnown RBP12.4□□□□□ -0.42
MED28-203ENST00000503945 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 NDST4Q9H3R1 872 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SLC32A1Q9H598 525 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 SUSD2Q9UGT4 822 aa12.4□□□□□ -0.42
MED28-203ENST00000503945 IGF2RP11717 2491 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 BECN2A8MW95 431 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 H0Y626 953 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
MED28-203ENST00000503945 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 MOCS3O95396 460 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 MOCS2O96007 188 aaPredicted RBP12.39□□□□□ -0.43
MED28-203ENST00000503945 HLA-EP13747 358 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 ABCB4P21439 1286 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PRKCHP24723 683 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 MAOBP27338 520 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 CD70P32970 193 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 SGSHP51688 502 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 FAM193AP78312 1265 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 APBA1Q02410 837 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PDCLQ13371 301 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 CAMK2GQ13555 558 aaPredicted RBP12.39□□□□□ -0.43
MED28-203ENST00000503945 PLEKHG6Q3KR16 790 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 CFAP52Q8N1V2 620 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 WDTC1Q8N5D0 677 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 SHC3Q92529 594 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms