RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 FIBINQ8TAL6 211 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 RXFP2Q8WXD0 754 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 EZH1Q92800 747 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 TBCBQ99426 244 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 OSBPL2Q9H1P3 480 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 NDRG2Q9UN36 371 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-212ENST00000502563 CACNA1HO95180 2353 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 A0A1B0GVM2 712 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 TCAF2A6NFQ2 919 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 DRGXA6NNA5 263 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 F5H5T6 163 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 GOLGA8SH3BPF8 625 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 K7EQS6 105 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 STK25O00506 426 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 LCA5LO95447 670 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 EGFP01133 1207 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 DCNP07585 359 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 PLEKP08567 350 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 SLC6A4P31645 630 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 HDAC4P56524 1084 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 NME3Q13232 169 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 GAS6Q14393 721 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 RABGAP1LQ5R372 815 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 DCUN1D2Q6PH85 259 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 TPGS1Q6ZTW0 290 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 TMC6Q7Z403 805 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF683Q8IZ20 524 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 CAMKK1Q8N5S9 505 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 USP33Q8TEY7 942 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 DDI1Q8WTU0 396 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 LMLNQ96KR4 655 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 CFAP57Q96MR6 1250 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 TKTL2Q9H0I9 626 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 FBRSL1Q9HCM7 1045 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 DNAJC17Q9NVM6 304 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 UVRAGQ9P2Y5 699 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 CNOT8Q9UFF9 292 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
UBE2D3-212ENST00000502563 PAGE1O75459 146 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 CLDN11O75508 207 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TDGF1P13385 188 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TFE3P19532 575 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TACR2P21452 398 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 HLA-FP30511 346 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 HOXC13P31276 330 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 ADRA1BP35368 520 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 PCK1P35558 622 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 PLK1P53350 603 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 PTPN5P54829 565 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 NRLP54845 237 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 RNASE9P60153 205 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 RPL7AP62424 266 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 AUHQ13825 339 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 PIGHQ14442 188 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 CCDC122Q5T0U0 273 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 MANEALQ5VSG8 457 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF783Q6ZMS7 281 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 CHSY1Q86X52 802 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 EMC1Q8N766 993 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 FAM172AQ8WUF8 416 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 RNF34Q969K3 372 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF653Q96CK0 615 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 CALR3Q96L12 384 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 CCDC42Q96M95 316 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 MCEEQ96PE7 176 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 GABRG3Q99928 467 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 DEF6Q9H4E7 631 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 DONSONQ9NYP3 566 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 HS3ST4Q9Y661 456 aa11.09□□□□□ -0.63
UBE2D3-212ENST00000502563 TBC1D3BA6NDS4 549 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 I6L893 689 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 SCAMP3O14828 347 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 LAMTOR5O43504 91 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 AKR1B10O60218 316 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 RNF40O75150 1001 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 MTA2O94776 668 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 LUC7L3O95232 432 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 ADCY5O95622 1261 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 H2AFZP0C0S5 128 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 TMEM253P0C7T8 217 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 CXCL12P48061 93 aa11.08□□□□□ -0.64
UBE2D3-212ENST00000502563 SLC6A11P48066 632 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms