RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TMPRSS4Q9NRS4 437 aa17.35■□□□□ 0.37
PRKCB-210ENST00000498739 HS3ST4Q9Y661 456 aa17.35■□□□□ 0.37
PRKCB-210ENST00000498739 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 AKR1B10O60218 316 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 DESP17661 470 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 TNFRSF4P43489 277 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 HDAC4P56524 1084 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 SLC18A3Q16572 532 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 ASTE1Q2TB18 679 aaPredicted RBP17.34■□□□□ 0.37
PRKCB-210ENST00000498739 C2orf27AQ580R0 203 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 RABGAP1LQ5R372 815 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 MFN1Q8IWA4 741 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 CARNMT1Q8N4J0 409 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 CENPIQ92674 756 aaPredicted RBP17.34■□□□□ 0.37
PRKCB-210ENST00000498739 CCDC42Q96M95 316 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 CNPY3Q9BT09 278 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 THAP2Q9H0W7 228 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 NHEJ1Q9H9Q4 299 aaPredicted RBP17.34■□□□□ 0.37
PRKCB-210ENST00000498739 MRPL47Q9HD33 250 aaKnown RBP17.34■□□□□ 0.37
PRKCB-210ENST00000498739 RAPGEFL1Q9UHV5 662 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 VANGL2Q9ULK5 521 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 SLC27A6Q9Y2P4 619 aa17.34■□□□□ 0.37
PRKCB-210ENST00000498739 PRRT4C9JH25 899 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 I6L893 689 aaPredicted RBP17.33■□□□□ 0.36
PRKCB-210ENST00000498739 ATG13O75143 517 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 PSMA2P25787 234 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 TIE1P35590 1138 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 CCR3P51677 355 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 OGDHQ02218 1023 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.36
PRKCB-210ENST00000498739 GEN1Q17RS7 908 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 ARL13BQ3SXY8 428 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 EMC10Q5UCC4 262 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 FBXL22Q6P050 247 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 ANKS1BQ7Z6G8 1248 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.36
PRKCB-210ENST00000498739 USP33Q8TEY7 942 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.36
PRKCB-210ENST00000498739 KCNH6Q9H252 994 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 NENFQ9UMX5 172 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 MYOFQ9NZM1 2061 aa17.33■□□□□ 0.36
PRKCB-210ENST00000498739 TMEM191CA6NGB0 347 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 CHURC1-FNTBB4DL54 471 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 H0Y626 953 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 H0Y858 1186 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 HLA-FP30511 346 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 KIR2DL1P43626 348 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 CXCL12P48061 93 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 GALCP54803 685 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 MRPS21P82921 87 aaKnown RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 SATB1Q01826 763 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 TCF15Q12870 199 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 CDH18Q13634 790 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 TTC39BQ5VTQ0 682 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 SCYL2Q6P3W7 929 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 C14orf80Q86SX3 495 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF513Q8N8E2 541 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF557Q8N988 423 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-210ENST00000498739 WFDC5Q8TCV5 224 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 IGSF8Q969P0 613 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 ACDQ96AP0 544 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 HAPLN3Q96S86 360 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 TRIM7Q9C029 511 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 ZDHHC4Q9NPG8 344 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 ABCB8Q9NUT2 735 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 SPTLC3Q9NUV7 552 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 C2orf42Q9NWW7 574 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 GGA2Q9UJY4 613 aa17.32■□□□□ 0.36
PRKCB-210ENST00000498739 LUC7L3O95232 432 aaKnown RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 PABPC1P11940 636 aaKnown RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CDC25BP30305 580 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 ADRA1BP35368 520 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CSTF1Q05048 431 aaKnown RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 RNF43Q68DV7 783 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 TSSK4Q6SA08 328 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 LRRC31Q6UY01 552 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 MAMSTRQ6ZN01 415 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 MAML2Q8IZL2 1156 aaPredicted RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 ALLCQ8N6M5 410 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CCDC185Q8N715 623 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 ARHGEF26Q96DR7 871 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 NUP85Q9BW27 656 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 PACSIN1Q9BY11 444 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
PRKCB-210ENST00000498739 PRMT8Q9NR22 394 aaPredicted RBP17.31■□□□□ 0.36
PRKCB-210ENST00000498739 A0A1B0GVM2 712 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 TCAF2A6NFQ2 919 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 E9PAM4 449 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 SRGAP2O75044 1071 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 KLF8O95600 359 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-210ENST00000498739 CYP1A2P05177 515 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 CD70P32970 193 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 IRAK1P51617 712 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 PTPN5P54829 565 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms