RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 BTNL9Q6UXG8 535 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CYFIP1Q7L576 1253 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LPCAT2Q7L5N7 544 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 HPS6Q86YV9 775 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RGL4Q8IZJ4 473 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 BEND7Q8N7W2 519 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SPERTQ8NA61 448 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC4A11Q8NBS3 891 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC35G2Q8TBE7 412 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SCFD1Q8WVM8 642 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TAMM41Q96BW9 452 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 OLFML3Q9NRN5 406 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 NDFIP2Q9NV92 336 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 UCKL1Q9NWZ5 548 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GIN1Q9NXP7 522 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RSL24D1Q9UHA3 163 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SNX9Q9Y5X1 595 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PDE4DIPQ5VU43 2346 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM114B3SHH9 223 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CLOCKO15516 846 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LRRN2O75325 713 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PGK2P07205 417 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DLATP10515 647 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 KITP10721 976 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MX2P20592 715 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SEPHS1P49903 392 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MXI1P50539 228 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RAP1GDS1P52306 607 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 COPAP53621 1224 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GALCP54803 685 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LMNB2Q03252 620 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 VGLL4Q14135 290 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SIX1Q15475 284 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PDK4Q16654 411 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 FKBP1CQ5VVH2 108 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM151BQ8IW70 566 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LENG9Q96B70 501 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 C12orf43Q96C57 262 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MTBPQ96DY7 904 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DCUN1D1Q96GG9 259 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ANKRD36BP1Q96IX9 119 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DEPDC7Q96QD5 511 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CYP4F11Q9HBI6 524 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 NKIRAS1Q9NYS0 192 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GINS2Q9Y248 185 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ADGRA3Q8IWK6 1321 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ZMYM2Q9UBW7 1377 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PCP4L1A6NKN8 68 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PRR5-ARHGAP8B1AHC4 643 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 AP1G1O43747 822 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 CALUO43852 315 aaPredicted RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 SCO1O75880 301 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 KCNH1O95259 989 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 FYNP06241 537 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 DLDP09622 509 aaKnown RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 SRGAP2CP0DJJ0 459 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 SRGAP2BP0DMP2 458 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 MYL2P10916 166 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PTPN1P18031 435 aaKnown RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 CPOXP36551 454 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PPM1FP49593 454 aaPredicted RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 TPTEP56180 551 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARHGAP8P85298 464 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 IL9RQ01113 521 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 GAD2Q05329 585 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ORC2Q13416 577 aaPredicted RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARHGEF6Q15052 776 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PPP1R3AQ16821 1122 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 KNOP1Q1ED39 458 aaKnown RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 CENPPQ6IPU0 288 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARHGEF18Q6ZSZ5 1173 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ERI1Q8IV48 349 aaKnown RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 BRSK2Q8IWQ3 736 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 LILRA2Q8N149 483 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 C2orf69Q8N8R5 385 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 GLIS1Q8NBF1 620 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PDZD8Q8NEN9 1154 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 ZNF398Q8TD17 642 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 OSCP1Q8WVF1 389 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 MECRQ9BV79 373 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 DCLK3Q9C098 648 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 C20orf27Q9GZN8 174 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 KLHL25Q9H0H3 589 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 GANQ9H2C0 597 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 SNX5Q9Y5X3 404 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 AP4B1Q9Y6B7 739 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 COL4A5P29400 1685 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 DNAH12Q6ZR08 3092 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 LAMB1P07942 1786 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 CAPN14A8MX76 684 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 TTC34A8MYJ7 566 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 LINC01387J3KSC0 135 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PSMD12O00232 456 aaPredicted RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 RTCAO00442 366 aaKnown RBP5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 SNPHO15079 494 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 TTC4O95801 387 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 NR3C1P04150 777 aa5.94□□□□□ -1.46
SOX2-OT-218ENST00000498731 PRKCAP17252 672 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms