RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 WFIKKN2Q8TEU8 576 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 CPLX3Q8WVH0 158 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 TBCBQ99426 244 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 TKTL2Q9H0I9 626 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 SIK2Q9H0K1 926 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 PIGVQ9NUD9 493 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 ABCB8Q9NUT2 735 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 CACNA2D2Q9NY47 1150 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 BCCIPQ9P287 314 aaKnown RBP eCLIP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 THAP10Q9P2Z0 257 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 GGA2Q9UJY4 613 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 WASH3PC4AMC7 463 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PAGE1O75459 146 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 ATP5BP06576 529 aaKnown RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 TFE3P19532 575 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 SDC4P31431 198 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PBX1P40424 430 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 ATP11AP98196 1134 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PTP4A2Q12974 167 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 CDH18Q13634 790 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 LPAL2Q16609 132 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 RABGAP1LQ5R372 815 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 KIAA0907Q7Z7F0 614 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 RNF214Q8ND24 703 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 RUBCNQ92622 972 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 IQCDQ96DY2 449 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 MYEOVQ96EZ4 313 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PRICKLE1Q96MT3 831 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 PRMT1Q99873 361 aaKnown RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 GABRG3Q99928 467 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 TTYH3Q9C0H2 523 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 ARHGEF38Q9NXL2 777 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 NCDNQ9UBB6 729 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 SMG5Q9UPR3 1016 aaKnown RBP13.24□□□□□ -0.29
HSPG2-213ENST00000498495 STON1Q9Y6Q2 735 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 KIAA1549LQ6ZVL6 1849 aa13.24□□□□□ -0.29
HSPG2-213ENST00000498495 A0A1W2PQJ5 194 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 TMCO5BA8MYB1 307 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 CBFA2T2O43439 604 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 MOCS3O95396 460 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ADCY5O95622 1261 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 SKILP12757 684 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 POLR2EP19388 210 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 CD70P32970 193 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 PRKCIP41743 596 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 IL12RB1P42701 662 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ATXN1P54253 815 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 AUHQ13825 339 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ZNF234Q14588 700 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 STARD3Q14849 445 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 OTUD1Q5VV17 481 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 MBLAC2Q68D91 279 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 RNF43Q68DV7 783 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 TRNP1Q6NT89 227 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 FBXL22Q6P050 247 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ADIPOR2Q86V24 386 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 C3orf20Q8ND61 904 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 MDGA1Q8NFP4 955 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 WFDC5Q8TCV5 224 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 HMGB4Q8WW32 186 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 RPRD1AQ96P16 312 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 VANGL2Q9ULK5 521 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 CAPN11Q9UMQ6 739 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 INVSQ9Y283 1065 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 LUC7L2Q9Y383 392 aaKnown RBP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.23□□□□□ -0.29
HSPG2-213ENST00000498495 RAD54BQ9Y620 910 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 HS3ST4Q9Y661 456 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
HSPG2-213ENST00000498495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 A0A1W2PQF6 199 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ANKRD62A6NC57 917 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms