RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DLL3Q9NYJ7 618 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 STIM2Q9P246 746 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 GGA2Q9UJY4 613 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 ITIH6Q6UXX5 1313 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.89■□□□□ 0.13
NUP50-219ENST00000497960 BCLAF3A2AJT9 711 aaKnown RBP15.89■□□□□ 0.13
NUP50-219ENST00000497960 AP5Z1O43299 807 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 GRAP2O75791 330 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 ERBB2P04626 1255 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 NDUFV2P19404 249 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SOX5P35711 763 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 STAT1P42224 750 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 IL12RB1P42701 662 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SGSHP51688 502 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 JAM2P57087 298 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SLC6A3Q01959 620 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 ZNF234Q14588 700 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 PTPN20Q4JDL3 420 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 PLA2G2CQ5R387 149 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 TAF3Q5VWG9 929 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 OLFML1Q6UWY5 402 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SERPINA13PQ6UXR4 307 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SLC36A4Q6YBV0 504 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 CHST9Q7L1S5 443 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 ERMP1Q7Z2K6 904 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 DGLUCYQ7Z3D6 616 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 CYP2U1Q7Z449 544 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 MFN1Q8IWA4 741 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.89■□□□□ 0.13
NUP50-219ENST00000497960 ATP6V0D2Q8N8Y2 350 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 MSANTD4Q8NCY6 345 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SORCS1Q8WY21 1168 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 IQCDQ96DY2 449 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 BTN2A3PQ96KV6 586 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 NUP58Q9BVL2 599 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 NUCKS1Q9H1E3 243 aaKnown RBP15.89■□□□□ 0.13
NUP50-219ENST00000497960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
NUP50-219ENST00000497960 DDIT4Q9NX09 232 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 PLA2G4CQ9UP65 541 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.89■□□□□ 0.13
NUP50-219ENST00000497960 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
NUP50-219ENST00000497960 SYNJ2BP-COX16A0A087WUM0 186 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 GFPT2O94808 682 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 IGLV3-25P01717 112 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 ATP5BP06576 529 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 ABCB4P21439 1286 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 CCR1P32246 355 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 CDH5P33151 784 aaPredicted RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 RPS24P62847 133 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 FOXK2Q01167 660 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 CDH18Q13634 790 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 ENPP2Q13822 863 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 TRIM14Q14142 442 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 SF3A2Q15428 464 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 FIGNQ5HY92 759 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 MS4A13Q5J8X5 152 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 SPDYCQ5MJ68 293 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 TMEM215Q68D42 235 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 SPECC1LQ69YQ0 1117 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 KIAA1324Q6UXG2 1013 aaKnown RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 SLC26A9Q7LBE3 791 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 CHSY1Q86X52 802 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 ERICH1Q86X53 443 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 VSTM4Q8IW00 320 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 RTKNQ9BST9 563 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 TTYH3Q9C0H2 523 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 CD248Q9HCU0 757 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 COX16Q9P0S2 106 aa15.88■□□□□ 0.13
NUP50-219ENST00000497960 MBD1Q9UIS9 605 aaPredicted RBP15.88■□□□□ 0.13
NUP50-219ENST00000497960 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 LRRC53A6NM62 1247 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 F5H5T6 163 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 DAB1O75553 588 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 EPHX1P07099 455 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 TPM1P09493 284 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 POLR2EP19388 210 aaKnown RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 TACR2P21452 398 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 ZNF75DP51815 510 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 ATXN1P54253 815 aaKnown RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 PITX1P78337 314 aaPredicted RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 RPL6Q02878 288 aaKnown RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 MTA1Q13330 715 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 FUT11Q495W5 492 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 RAP1GAP2Q684P5 730 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 MBLAC2Q68D91 279 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 RNF43Q68DV7 783 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 KIAA0907Q7Z7F0 614 aaPredicted RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 NOP9Q86U38 636 aaKnown RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 ADIPOR2Q86V24 386 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 TMEFF1Q8IYR6 380 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 CARNMT1Q8N4J0 409 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 FRMD1Q8N878 549 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 ZNF397Q8NF99 534 aaPredicted RBP15.87■□□□□ 0.13
NUP50-219ENST00000497960 FIBINQ8TAL6 211 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 PIGKQ92643 395 aa15.87■□□□□ 0.13
NUP50-219ENST00000497960 C18orf8Q96DM3 657 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms