RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 CDKL2Q92772 493 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 CCDC124Q96CT7 223 aaKnown RBP5.83□□□□□ -1.48
PHC3-217ENST00000497658 CFAP36Q96G28 342 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 CNDP1Q96KN2 507 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 PSMG3-AS1Q96PY0 264 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 EBNA1BP2Q99848 306 aaKnown RBP5.83□□□□□ -1.48
PHC3-217ENST00000497658 SH2D3AQ9BRG2 576 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 CALN1Q9BXU9 219 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 NIF3L1Q9GZT8 377 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 PDZD7Q9H5P4 517 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.83□□□□□ -1.48
PHC3-217ENST00000497658 PCDH18Q9HCL0 1135 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 MRGBPQ9NV56 204 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 UBAP1Q9NZ09 502 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 MOCS1Q9NZB8 636 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 HACD3Q9P035 362 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 RSL24D1Q9UHA3 163 aaKnown RBP5.83□□□□□ -1.48
PHC3-217ENST00000497658 ZNHIT2Q9UHR6 403 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 BLOC1S6Q9UL45 172 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 CCPG1Q9ULG6 757 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 PAIP2BQ9ULR5 123 aaKnown RBP5.83□□□□□ -1.48
PHC3-217ENST00000497658 USP18Q9UMW8 372 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
PHC3-217ENST00000497658 CCDC195A0A1B0GUA6 201 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 HMX2A2RU54 273 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TMEM150BA6NC51 233 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ZNF487B1APH4 448 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ZNF195O14628 629 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 PLIN3O60664 434 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 AVILO75366 819 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 H2AFYO75367 372 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 PDE5AO76074 875 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 ATG7O95352 703 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TRUB2O95900 331 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 CCNE2O96020 404 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
PHC3-217ENST00000497658 FGF3P11487 239 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 MLNP12872 115 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 GYS1P13807 737 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ZNF23P17027 643 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TPSB2P20231 275 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 MX2P20592 715 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 PROZP22891 400 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 YY1P25490 414 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 SSTR3P32745 418 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 NAMPTP43490 491 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ACOT2P49753 483 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 NUMBP49757 651 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ERFP50548 548 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 CDK9P50750 372 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 NUP107P57740 925 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TUBA4AP68366 448 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 SRSF11Q05519 484 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 TRPC3Q13507 836 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 SPIDRQ14159 915 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ADGRE1Q14246 886 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 PGM5Q15124 567 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TPSAB1Q15661 275 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 CCDC153Q494R4 210 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 TBC1D10BQ4KMP7 808 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 TCHHL1Q5QJ38 904 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 MROH9Q5TGP6 573 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 LMBRD2Q68DH5 695 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 FRMD7Q6ZUT3 714 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 POU5F2Q8N7G0 328 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 RP9Q8TA86 221 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 GPRASP2Q96D09 838 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 SIGLEC10Q96LC7 697 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 PRPF18Q99633 342 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 NAT9Q9BTE0 207 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 MRPL1Q9BYD6 325 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 SDCBP2Q9H190 292 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 VPS33BQ9H267 617 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 C10orf88Q9H8K7 445 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 ZNF395Q9H8N7 513 aaPredicted RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 IFT122Q9HBG6 1241 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 CYP4F11Q9HBI6 524 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 MRPL40Q9NQ50 206 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 CISHQ9NSE2 258 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 DDX18Q9NVP1 670 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 COL20A1Q9P218 1284 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 G3BP2Q9UN86 482 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 GNEQ9Y223 722 aaKnown RBP5.82□□□□□ -1.48
PHC3-217ENST00000497658 PTPRJQ12913 1337 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 CNTNAP2Q9UHC6 1331 aa5.82□□□□□ -1.48
PHC3-217ENST00000497658 SMCHD1A6NHR9 2005 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 SH3PXD2BA1X283 911 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 RGSL1A5PLK6 1076 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 H7C0C1 242 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 K7ERI5 159 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 GPR25O00155 361 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 KCNN4O15554 427 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 CBFA2T3O75081 653 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 PSAPP07602 524 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 APRTP07741 180 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 CSH1P0DML2 217 aa5.81□□□□□ -1.48
PHC3-217ENST00000497658 CSH2P0DML3 217 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms