RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ASTN2O75129 1339 aaPredicted RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 KCNH1O95259 989 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 SAT1P21673 171 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 BMXP51813 675 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 HADHQ16836 314 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 CYGBQ8WWM9 190 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 SNX27Q96L92 541 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 NDUFB10O96000 172 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF12P17014 697 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ADORA2AP29274 412 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 L1CAMP32004 1257 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 SOX11P35716 441 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 YAP1P46937 504 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 NOVP48745 357 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ABCE1P61221 599 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 RALGDSQ12967 914 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC15A4Q8N697 577 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 JOSD2Q8TAC2 188 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNHIT2Q9UHR6 403 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 A6NL46 340 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 AKAP10O43572 662 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 GNAO1P09471 354 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 EEF1B2P24534 225 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 TYK2P29597 1187 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ALDH3B2P48448 385 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 CUL2Q13617 745 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 IKBKEQ14164 716 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ENOSF1Q7L5Y1 443 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 TMCO5AQ8N6Q1 288 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 AP4S1Q9Y587 144 aa13.4□□□□□ -0.26
GAPVD1-220ENST00000497580 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 SPAG6O75602 509 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 SERPINB2P05120 415 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 KDELR1P24390 212 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GRIA1P42261 906 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 CCR10P46092 362 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 CDH6P55285 790 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 CMC1Q7Z7K0 106 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 DHRS1Q96LJ7 313 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 SORT1Q99523 831 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 OLAHQ9NV23 265 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 TMEM216Q9P0N5 145 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ST14Q9Y5Y6 855 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ENTPD3O75355 529 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 TIPRLO75663 272 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 TFE3P19532 575 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 PTK2BQ14289 1009 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 SCYL2Q6P3W7 929 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 SNX31Q8N9S9 440 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 TBC1D15Q8TC07 691 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 APOBEC3GQ9HC16 384 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 KCND2Q9NZV8 630 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 AURKCQ9UQB9 309 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 HMX2A2RU54 273 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GMNNO75496 209 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ALDH2P05091 517 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 PRDX6P30041 224 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 YWHABP31946 246 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GABRB2P47870 512 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 WNT7BP56706 349 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 ORC1Q13415 861 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 PCLAFQ15004 111 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 CES3Q6UWW8 571 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 PHF13Q86YI8 300 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-220ENST00000497580 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms