RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 RRN3Q9NYV6 651 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 SIRT4Q9Y6E7 314 aaPredicted RBP5.39□□□□□ -1.55
VPS36-206ENST00000497149 TISP43B9A030 160 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 PRRT4C9JH25 899 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 ALDOAP04075 364 aaKnown RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 ZNF84P51523 738 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 TUBA4AP68366 448 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 TAF12Q16514 161 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 FAM110CQ1W6H9 321 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 CERKLQ49MI3 558 aaPredicted RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 TMEM119Q4V9L6 283 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 CC2D1BQ5T0F9 858 aaKnown RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 PNISRQ8TF01 805 aaKnown RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 COG8Q96MW5 612 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 PIGSQ96S52 555 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 NPAS1Q99742 590 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 NUAK2Q9H093 628 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 R3HDMLQ9H3Y0 253 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 RIC8AQ9NPQ8 531 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 GTF2A1LQ9UNN4 478 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 RCE1Q9Y256 329 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 DERAQ9Y315 318 aa5.38□□□□□ -1.55
VPS36-206ENST00000497149 LRRFIP2Q9Y608 721 aaKnown RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 COPG1Q9Y678 874 aaKnown RBP5.38□□□□□ -1.55
VPS36-206ENST00000497149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 TMEM232C9JQI7 657 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 HNRNPRO43390 633 aaKnown RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 CYP2A6P11509 494 aaPredicted RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 PCP4P48539 62 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 HMGA2P52926 109 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 SLC37A1P57057 533 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 KPNB1Q14974 876 aaKnown RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 LRRC24Q50LG9 513 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 TMEM88Q6PEY1 159 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 C16orf71Q8IYS4 520 aaPredicted RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 PTGR2Q8N8N7 351 aaPredicted RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 FSIP1Q8NA03 581 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 SEMA6DQ8NFY4 1073 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 ZNF398Q8TD17 642 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 KTI12Q96EK9 354 aaPredicted RBP5.37□□□□□ -1.55
VPS36-206ENST00000497149 P2RY11Q96G91 374 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 GPR78Q96P69 363 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 SENP7Q9BQF6 1050 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 ARHGAP39Q9C0H5 1083 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 PRDM16Q9HAZ2 1276 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 PLEKHA2Q9HB19 425 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 PDE11AQ9HCR9 933 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 MAFFQ9ULX9 164 aa5.37□□□□□ -1.55
VPS36-206ENST00000497149 NCAM2O15394 837 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 SEPT4O43236 478 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ENO1P06733 434 aaKnown RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 PYGLP06737 847 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 RFPL3SP0C7P2 107 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 CHN1P15882 459 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 IDUAP35475 653 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 NHLH1Q02575 133 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 DMWDQ09019 674 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 GLE1Q53GS7 698 aaKnown RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 ZNF484Q5JVG2 852 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 KIAA1324Q6UXG2 1013 aaKnown RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 SYNE3Q6ZMZ3 975 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ZNF788Q6ZQV5 615 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 RD3Q7Z3Z2 195 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ADGRG3Q86Y34 549 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ADPRHL1Q8NDY3 354 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 CEP70Q8NHQ1 597 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 HERVK_113Q902F9 699 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 NELL1Q92832 810 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 USP13Q92995 863 aaPredicted RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 ARRDC3Q96B67 414 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 EVI5LQ96CN4 794 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ZNF764Q96H86 408 aaPredicted RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 HTATIP2Q9BUP3 242 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 GATA5Q9BWX5 397 aaPredicted RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 TRIM2Q9C040 744 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 RMI1Q9H9A7 625 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 SFXN1Q9H9B4 322 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 NOD2Q9HC29 1040 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 ARL8BQ9NVJ2 186 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 C9orf78Q9NZ63 289 aaPredicted RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
VPS36-206ENST00000497149 COX11Q9Y6N1 276 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 SPATA31A5Q5VU36 1347 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 SPATA31A6Q5VVP1 1343 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 SPATA31A7Q8IWB4 1347 aa5.36□□□□□ -1.55
VPS36-206ENST00000497149 RRN3P2A6NIE6 340 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 STX16-NPEPL1H3BU86 382 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 STX16O14662 325 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 RRHO14718 337 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 PROK1P58294 105 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 SHC2P98077 582 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 SEC23BQ15437 767 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 CTXN3Q4LDR2 81 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 TFAP2DQ7Z6R9 452 aa5.35□□□□□ -1.55
VPS36-206ENST00000497149 LRRTM4Q86VH4 590 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms