RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 WDR27A2RRH5 827 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 SDR42E2A6NKP2 422 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 HGSO14964 777 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 UGT1A9O60656 530 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 POMCP01189 267 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PGAM1P18669 254 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF135P52742 658 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 ELF3P78545 371 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 IFRD2Q12894 506 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM32Q13049 653 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PAN2Q504Q3 1202 aaKnown RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CYS1Q717R9 158 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CCNJLQ8IV13 435 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PARP9Q8IXQ6 854 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TTC17Q96AE7 1141 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PGBD4Q96DM1 585 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 MYLK2Q9H1R3 596 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 UGT1A7Q9HAW7 530 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 UGT1A10Q9HAW8 530 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 UGT1A8Q9HAW9 530 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 DMAP1Q9NPF5 467 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 DSEQ9UL01 958 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CHKBQ9Y259 395 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 A0A0U1RQF3 1178 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 I6L893 689 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 NCAM2O15394 837 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 RFPL1O75677 317 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 B3GAT3O94766 335 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CCNB1P14635 433 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 IBSPP21815 317 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PAX3P23760 479 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CNTFP26441 200 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 BRCC3P46736 316 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 CACNB2Q08289 660 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TUSC3Q13454 348 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 LPIN1Q14693 890 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 SNCBQ16143 134 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 KCNA10Q16322 511 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-220ENST00000496711 SCML4Q8N228 414 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 EDEM1Q92611 657 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PTPRN2Q92932 1015 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 ERP27Q96DN0 273 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 UROC1Q96N76 676 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 EPAS1Q99814 870 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 COLEC11Q9BWP8 271 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TSSK1BQ9BXA7 367 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TXLNGQ9NUQ3 528 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 TLL2Q9Y6L7 1015 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 PCNTO95613 3336 aa13.42□□□□□ -0.26
GARNL3-220ENST00000496711 M0QZQ0 153 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 C2CD2LO14523 706 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 MGRN1O60291 552 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 UNC5CO95185 931 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 AMHP03971 560 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 NQO1P15559 274 aaKnown RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 MGAT1P26572 445 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 TM4SF4P48230 202 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 SERPINB4P48594 390 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 CXCR3P49682 368 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 PRKCZQ05513 592 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 NAB1Q13506 487 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 PM20D1Q6GTS8 502 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 TP53INP2Q8IXH6 220 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 NUP205Q92621 2012 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 CDKL2Q92772 493 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 KLHL29Q96CT2 875 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 OXNAD1Q96HP4 312 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 ADAM2Q99965 735 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 NAT9Q9BTE0 207 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 KLHL8Q9P2G9 620 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-220ENST00000496711 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
GARNL3-220ENST00000496711 KLF11O14901 512 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 IL1BP01584 269 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 NEFHP12036 1026 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 SKIP12755 728 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 BGNP21810 368 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 BDNFP23560 247 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PTPN3P26045 913 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-220ENST00000496711 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-220ENST00000496711 SERPINB6P35237 376 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms