RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 CHST9Q7L1S5 443 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 PTRH1Q86Y79 214 aaKnown RBP12.23□□□□□ -0.45
ATG3-209ENST00000496423 TBC1D3Q8IZP1 549 aaPredicted RBP12.23□□□□□ -0.45
ATG3-209ENST00000496423 SLC25A45Q8N413 288 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 ZNF366Q8N895 744 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
ATG3-209ENST00000496423 WDR48Q8TAF3 677 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 SAAL1Q96ER3 474 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 CALML4Q96GE6 196 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 MRPL45Q9BRJ2 306 aaKnown RBP12.23□□□□□ -0.45
ATG3-209ENST00000496423 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
ATG3-209ENST00000496423 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 TMEM30AQ9NV96 361 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 INTS13Q9NVM9 706 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 NLGN3Q9NZ94 848 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 DMTF1Q9Y222 760 aa12.23□□□□□ -0.45
ATG3-209ENST00000496423 CCDC187A0A096LP49 1063 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 FFAR2O15552 330 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 TCEA3O75764 348 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 AP1G2O75843 785 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 DLDP09622 509 aaKnown RBP12.22□□□□□ -0.45
ATG3-209ENST00000496423 POLR2EP19388 210 aaKnown RBP12.22□□□□□ -0.45
ATG3-209ENST00000496423 ELAVL4P26378 380 aaKnown RBP12.22□□□□□ -0.45
ATG3-209ENST00000496423 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 MANEAQ5SRI9 462 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 TMEM215Q68D42 235 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 FAM35AQ86V20 835 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
ATG3-209ENST00000496423 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 AHI1Q8N157 1196 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 CPXM2Q8N436 756 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 OR14C36Q8NHC7 312 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 KLHDC7BQ96G42 594 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 APOLD1Q96LR9 279 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 ACCSQ96QU6 501 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 PCDHB11Q9Y5F2 797 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 ENTPD2Q9Y5L3 495 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
ATG3-209ENST00000496423 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
ATG3-209ENST00000496423 A0A1W2PP55 124 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 WNT9AO14904 365 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.45
ATG3-209ENST00000496423 CORO1AP31146 461 aaKnown RBP12.21□□□□□ -0.45
ATG3-209ENST00000496423 ZNF445P59923 1031 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 CST6Q15828 149 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 WDR72Q3MJ13 1102 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 DYMQ7RTS9 669 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 ZNF276Q8N554 614 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 ZNF557Q8N988 423 aaPredicted RBP12.21□□□□□ -0.45
ATG3-209ENST00000496423 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
ATG3-209ENST00000496423 DPEP3Q9H4B8 488 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 SCML2Q9UQR0 700 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 PCDHGA7Q9Y5G6 932 aa12.21□□□□□ -0.45
ATG3-209ENST00000496423 TMX2-CTNND1H3BSU7 103 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 MID1O15344 667 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 RNGTTO60942 597 aaKnown RBP12.2□□□□□ -0.46
ATG3-209ENST00000496423 GOT1P17174 413 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 SLC8A1P32418 973 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 WNT7BP56706 349 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
ATG3-209ENST00000496423 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 JAMLQ86YT9 394 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 DENND1CQ8IV53 801 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 RASSF8Q8NHQ8 419 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 KLHL11Q9NVR0 708 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATG3-209ENST00000496423 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 NAGPAQ9UK23 515 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 AGO1Q9UL18 857 aaKnown RBP12.2□□□□□ -0.46
ATG3-209ENST00000496423 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
ATG3-209ENST00000496423 SLC12A8A0AV02 714 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 GOLGA8IPA6NC78 632 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 GOLGA8JA6NMD2 632 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 PRAMEF26H0Y7S4 382 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 LATO43561 262 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 AGFG2O95081 481 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 ADH1BP00325 375 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 KLKB1P03952 638 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
ATG3-209ENST00000496423 LIPCP11150 499 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 TGM2P21980 687 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 SLC5A2P31639 672 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 TRPC3Q13507 836 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 IL17AQ16552 155 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 SETMARQ53H47 684 aaPredicted RBP12.19□□□□□ -0.46
ATG3-209ENST00000496423 MBLAC2Q68D91 279 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 SCARA3Q6AZY7 606 aa12.19□□□□□ -0.46
ATG3-209ENST00000496423 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms