RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HCAR3P49019 387 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 SESN2P58004 480 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TMPRSS15P98073 1019 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 RAB41Q5JT25 222 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PID1Q7Z2X4 250 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 CLNKQ7Z7G1 428 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 NUDCD3Q8IVD9 361 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ZNF567Q8N184 647 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ACMSDQ8TDX5 336 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 E2F7Q96AV8 911 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 SMOQ99835 787 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TRIM56Q9BRZ2 755 aaKnown RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 BRD8Q9H0E9 1235 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 KLHL8Q9P2G9 620 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 MYBPHLA2RUH7 354 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ARL5CA6NH57 179 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 MEIS3P2A8K0S8 358 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 F5H423 210 aaPredicted RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 BIRC5O15392 142 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 MTSS1O43312 755 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 DNAJC6O75061 913 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 HAUS5O94927 633 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 FYNP06241 537 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 POLBP06746 335 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 USP17L7P0C7H9 530 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 MX2P20592 715 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 MGAT1P26572 445 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 PTPN4P29074 926 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 SERPINB6P35237 376 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ZBTB16Q05516 673 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 WASHC5Q12768 1159 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 DBN1Q16643 649 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 INTS6LQ5JSJ4 861 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 BSPRYQ5W0U4 402 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CST9Q5W186 159 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 KYAT3Q6YP21 454 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 TACO1Q9BSH4 297 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 TMEM120AQ9BXJ8 343 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 RRAGCQ9HB90 399 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 SPC25Q9HBM1 224 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 WDR6Q9NNW5 1121 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 DDIT4Q9NX09 232 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 TXNDC16Q9P2K2 825 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 LNPEPQ9UIQ6 1025 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 TIMM13Q9Y5L4 95 aaPredicted RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ZNF638Q14966 1978 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 HMX2A2RU54 273 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 WFS1O76024 890 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CBX6O95503 412 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 IGHA2P01877 340 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 DLDP09622 509 aaKnown RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CTSHP09668 335 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 T-ENOLP0DO92 83 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ODC1P11926 461 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 NIPAL4Q0D2K0 466 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CRYMQ14894 314 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 E2F5Q15329 346 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 STXBP5Q5T5C0 1151 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 STKLD1Q8NE28 680 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 AGAP11Q8TF27 550 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 EPAS1Q99814 870 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CEP41Q9BYV8 373 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
CMSS1-208ENST00000496116 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 KCNK13Q9HB14 408 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 TRPM7Q96QT4 1865 aa11.38□□□□□ -0.59
CMSS1-208ENST00000496116 MYADML2A6NDP7 307 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 CASTOR2A6NHX0 329 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 RAB27AP51159 221 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 SCNN1GP51170 649 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 PPIDQ08752 370 aaKnown RBP11.37□□□□□ -0.59
CMSS1-208ENST00000496116 SEMA3BQ13214 749 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 CHI3L2Q15782 390 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 SPANXN3Q5MJ09 141 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 PACS1Q6VY07 963 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 METTL23Q86XA0 190 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 RNF169Q8NCN4 708 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 ZMIZ2Q8NF64 920 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 ARNTL2Q8WYA1 636 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 IRGQQ8WZA9 623 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 LPPQ93052 612 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
CMSS1-208ENST00000496116 MECRQ9BV79 373 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 TRIM62Q9BVG3 475 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 MIOSQ9NXC5 875 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 KCNK4Q9NYG8 393 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms