RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 VAC14Q08AM6 782 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 AP1B1Q10567 949 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SCAPQ12770 1279 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 IFRD2Q12894 506 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 SPARCL1Q14515 664 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 KCNJ11Q14654 390 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 TRIM71Q2Q1W2 868 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 SH3PXD2AQ5TCZ1 1133 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 NCBP2-AS2Q69YL0 99 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 ZNF280DQ6N043 979 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 KCNT2Q6UVM3 1135 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 VSTM1Q6UX27 236 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 RFX8Q6ZV50 586 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CYP4V2Q6ZWL3 525 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 SRRM1Q8IYB3 904 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 CCDC185Q8N715 623 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CCNYQ8ND76 341 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 MCUQ8NE86 351 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CHD5Q8TDI0 1954 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 HTR3CQ8WXA8 447 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GRAMD1AQ96CP6 724 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CABS1Q96KC9 395 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SPATA13Q96N96 652 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SERPINB11Q96P15 392 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 VAT1Q99536 393 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 NAT9Q9BTE0 207 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 ADAM7Q9H2U9 754 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CCDC134Q9H6E4 229 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 ACSS3Q9H6R3 686 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SSU72Q9NP77 194 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 CRTAC1Q9NQ79 661 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 PRDM9Q9NQV7 894 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 EIF2B3Q9NR50 452 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 OLA1Q9NTK5 396 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 SAGE1Q9NXZ1 904 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 KLHL8Q9P2G9 620 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 SAE1Q9UBE0 346 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 TBK1Q9UHD2 729 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 PHF24Q9UPV7 400 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 CHMP2BQ9UQN3 213 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 PCDHB7Q9Y5E2 793 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 TIMM13Q9Y5L4 95 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 TET1Q8NFU7 2136 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MTCL1Q9Y4B5 1905 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 TMEM120BA0PK00 339 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MYBPHLA2RUH7 354 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 FAM47DPA6NHR8 397 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 OR6C75A6NL08 312 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MEIS3P2A8K0S8 358 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ERI2A8K979 691 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 DNM1LO00429 736 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 ST8SIA5O15466 376 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MGEA5O60502 916 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 KRT37O76014 449 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 RTN3O95197 1032 aaPredicted RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 ZWINTO95229 277 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 S1PR4O95977 384 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 APOEP02649 317 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 VIMP08670 466 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 USP17L7P0C7H9 530 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MLNP12872 115 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 GOT1P17174 413 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 AMPD1P23109 780 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 BDNFP23560 247 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 CNTFP26441 200 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 GARSP41250 739 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 MAGEA6P43360 314 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SERPINB9P50453 376 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SLC18A1P54219 525 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ZNF33AQ06730 810 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 NAB1Q13506 487 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 PAFAH1B3Q15102 231 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 CA9Q16790 459 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 PAN2Q504Q3 1202 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 TNFAIP8L3Q5GJ75 292 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 HHATQ5VTY9 493 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TIGD7Q6NT04 549 aaPredicted RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 FAM171BQ6P995 826 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 CAPN12Q6ZSI9 719 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 C3orf62Q6ZUJ4 267 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 CCDC121Q6ZUS5 278 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 EXOC3L1Q86VI1 746 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ANKMY2Q8IV38 441 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SCN4BQ8IWT1 228 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 LZTR1Q8N653 840 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 OTUD6BQ8N6M0 293 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 PQLC3Q8N755 202 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ANKRD42Q8N9B4 389 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 GLIS1Q8NBF1 620 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 CCDC197Q8NCU1 140 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 GABPB2Q8TAK5 448 aaPredicted RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 HASPINQ8TF76 798 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms