RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 MGARPQ8TDB4 240 aa9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 PLD4Q96BZ4 506 aa9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 ZDHHC6Q9H6R6 413 aa9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 TSR3Q9UJK0 312 aaKnown RBP9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 FOCADQ5VW36 1801 aa9.73□□□□□ -0.85
GAPVD1-219ENST00000495955 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 ACSL4O60488 711 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 TACR2P21452 398 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 GRAMD4Q6IC98 578 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 KATNAL2Q8IYT4 538 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 PPP4R1Q8TF05 950 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 VPS39Q96JC1 886 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 TTYH3Q9C0H2 523 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 GKN1Q9NS71 199 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 VPS18Q9P253 973 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 M0QZQ0 153 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 KCNK1O00180 336 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 OAZ2O95190 189 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 RHOP08100 348 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 DDX6P26196 483 aaKnown RBP eCLIP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 GDI1P31150 447 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 FDFT1P37268 417 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 NR2C2P49116 596 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 TRIP4Q15650 581 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 C9orf50Q5SZB4 431 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 C4orf22Q6V702 233 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 JAMLQ86YT9 394 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 C3orf58Q8NDZ4 430 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 GRIN3AQ8TCU5 1115 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 NCKAP1Q9Y2A7 1128 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 RFXAPO00287 272 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 ADRA1BP35368 520 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 PCK1P35558 622 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 MTHFRP42898 656 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 TRIM71Q2Q1W2 868 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 ACBD5Q5T8D3 534 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 LINC00523Q86TU6 105 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 TRAIPQ9BWF2 469 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 PARD6BQ9BYG5 372 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 DOLKQ9UPQ8 538 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 CASP8AP2Q9UKL3 1982 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 WDR27A2RRH5 827 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 LINC01553A4QN01 128 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 AAK1Q2M2I8 961 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 KIAA1324Q6UXG2 1013 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 KCTD13Q8WZ19 329 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 SMG9Q9H0W8 520 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 NDFIP2Q9NV92 336 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 SCML2Q9UQR0 700 aa9.72□□□□□ -0.85
GAPVD1-219ENST00000495955 A0A0U1RQJ8 604 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 GRM6O15303 877 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 SERPINF2P08697 491 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 HNRNPA1P09651 372 aaKnown RBP eCLIP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 EPCAMP16422 314 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 MMP13P45452 471 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 AIF1P55008 147 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 POM121L1PQ3SYA9 428 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 NPNTQ6UXI9 565 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 LPCAT1Q8NF37 534 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ATRIPQ8WXE1 791 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ALKBH8Q96BT7 664 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 APOL2Q9BQE5 337 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 FICDQ9BVA6 458 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ADGRE3Q9BY15 652 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 NSRP1Q9H0G5 558 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ZFP37Q9Y6Q3 630 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 CLUHO75153 1309 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 RCCD1A6NED2 376 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 STX7O15400 261 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 TAS2R40P59535 323 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 C15orf39Q6ZRI6 1047 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 APTXQ7Z2E3 356 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 GSPT2Q8IYD1 628 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 TTC30BQ8N4P2 665 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 CELF5Q8N6W0 485 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ZSCAN18Q8TBC5 510 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 HTR3CQ8WXA8 447 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 TRMT61BQ9BVS5 477 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 SAE1Q9UBE0 346 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 ANGPTL3Q9Y5C1 460 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 PLXNB2O15031 1838 aa9.71□□□□□ -0.85
GAPVD1-219ENST00000495955 KCNU1A8MYU2 1149 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 E9PAM4 449 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 C1RP00736 705 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CXCL10P02778 98 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 RAB33AQ14088 237 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 NETO2Q8NC67 525 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 SLC35F5Q8WV83 523 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms