RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CLDN6P56747 220 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 DLG4P78352 724 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 CEBPZQ03701 1054 aaKnown RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 KCNH2Q12809 1159 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 PRAMEF14Q5SWL7 426 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ADGRF1Q5T601 910 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 MBLAC2Q68D91 279 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 KANSL1Q7Z3B3 1105 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ZNF366Q8N895 744 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ZNF557Q8N988 423 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 KDM1BQ8NB78 822 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ZNF248Q8NDW4 579 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 OR2T34Q8NGX1 318 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 MYO19Q96H55 970 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 SLC6A18Q96N87 628 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 OLA1Q9NTK5 396 aaKnown RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ABCB8Q9NUT2 735 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 FBXL12Q9NXK8 326 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 GGA2Q9UJY4 613 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 FZD4Q9ULV1 537 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 CLCA2Q9UQC9 943 aa14.02□□□□□ -0.17
COL1A1-209ENST00000495677 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 B8ZZF3 427 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 RNASEH1O60930 286 aaKnown RBP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 CLSTN1O94985 981 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 POLR2EP19388 210 aaKnown RBP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 GLDCP23378 1020 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 YWHAGP61981 247 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 CXADRP78310 365 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 E2F1Q01094 437 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 CUL4AQ13619 759 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 KCNJ12Q14500 433 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 C8orf34Q49A92 452 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 NCEH1Q6PIU2 408 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 RSRC2Q7L4I2 434 aaKnown RBP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 ZC3H3Q8IXZ2 948 aaKnown RBP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 LINC00301Q8NCQ3 95 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 TTC17Q96AE7 1141 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 ZNF578Q96N58 590 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-209ENST00000495677 ARID3AQ99856 593 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 NEUROG2Q9H2A3 272 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 SLC39A2Q9NP94 309 aa14.01□□□□□ -0.17
COL1A1-209ENST00000495677 TLR4O00206 839 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 MAPK13O15264 365 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 PPP6R2O75170 966 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 DXOO77932 396 aaKnown RBP14□□□□□ -0.17
COL1A1-209ENST00000495677 HLA-DRAP01903 254 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 NXPH1P58417 271 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 INSM1Q01101 510 aaPredicted RBP14□□□□□ -0.17
COL1A1-209ENST00000495677 CCDC173Q0VFZ6 552 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 BNIP3Q12983 259 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 TAF1BQ53T94 588 aaPredicted RBP14□□□□□ -0.17
COL1A1-209ENST00000495677 SLC45A4Q5BKX6 768 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 C1orf220Q5T0J3 134 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 IQCHQ86VS3 1027 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 LSMEM2Q8N112 164 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 MFSD2AQ8NA29 543 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 HIC2Q96JB3 615 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 LMLNQ96KR4 655 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 ZSCAN16Q9H4T2 348 aaPredicted RBP14□□□□□ -0.17
COL1A1-209ENST00000495677 CLMPQ9H6B4 373 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
COL1A1-209ENST00000495677 SPTA1P02549 2419 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 TARSL2A2RTX5 802 aaKnown RBP13.99□□□□□ -0.17
COL1A1-209ENST00000495677 FAM47DPA6NHR8 397 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 PDXKO00764 312 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 LATO43561 262 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 KIF20AO95235 890 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 ASLP04424 464 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 SYT1P21579 422 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 TMPRSS3P57727 454 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 MCCD1P59942 119 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-209ENST00000495677 ENPEPQ07075 957 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 OVGP1Q12889 678 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 CST6Q15828 149 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 HNRNPA1L2Q32P51 320 aaKnown RBP13.99□□□□□ -0.17
COL1A1-209ENST00000495677 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 BROXQ5VW32 411 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 ARHGAP17Q68EM7 881 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 BHLHA9Q7RTU4 235 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 PIGZQ86VD9 579 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 FMNL3Q8IVF7 1028 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 TTC39CQ8N584 583 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 FIBINQ8TAL6 211 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 AZIN2Q96A70 460 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 DHX58Q96C10 678 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 LGMNQ99538 433 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 IMPG2Q9BZV3 1241 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
COL1A1-209ENST00000495677 AASDHPPTQ9NRN7 309 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 SERGEFQ9UGK8 458 aa13.99□□□□□ -0.17
COL1A1-209ENST00000495677 COL27A1Q8IZC6 1860 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-209ENST00000495677 A0A1W2PP55 124 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 WNT9AO14904 365 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 IRAK2O43187 625 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms