RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 EXOC4Q96A65 974 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 MRPL47Q9HD33 250 aaKnown RBP20.11■□□□□ 0.81
HDAC4-212ENST00000495497 IMPACTQ9P2X3 320 aa20.11■□□□□ 0.81
HDAC4-212ENST00000495497 TBC1D3BA6NDS4 549 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-212ENST00000495497 F5H5T6 163 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 RNF40O75150 1001 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 APODP05090 189 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 H2AFZP0C0S5 128 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 GRIA2P42262 883 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 IRAK1P51617 712 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 PKN3Q6P5Z2 889 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 H2AFVQ71UI9 128 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 ARFGAP1Q8N6T3 406 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 HJURPQ8NCD3 748 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-212ENST00000495497 VANGL2Q9ULK5 521 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 PAXBP1Q9Y5B6 917 aa20.1■□□□□ 0.81
HDAC4-212ENST00000495497 FECHP22830 423 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 ADRA1BP35368 520 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 RPS9P46781 194 aaKnown RBP20.09■□□□□ 0.81
HDAC4-212ENST00000495497 EMC10Q5UCC4 262 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 DAB2IPQ5VWQ8 1189 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 CARNMT1Q8N4J0 409 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 TERB1Q8NA31 727 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 DTWD2Q8NBA8 298 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 CTNNBL1Q8WYA6 563 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-212ENST00000495497 RPRD1AQ96P16 312 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-212ENST00000495497 ZDHHC4Q9NPG8 344 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 POLR3BQ9NW08 1133 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-212ENST00000495497 CTTNBP2NLQ9P2B4 639 aa20.09■□□□□ 0.81
HDAC4-212ENST00000495497 A0A0A0MRY4 1105 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 PRRT4C9JH25 899 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 TMEM253P0C7T8 217 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 MTAPQ13126 283 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 GEN1Q17RS7 908 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 C10orf76Q5T2E6 689 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 ARTNQ5T4W7 220 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 TMTC1Q8IUR5 882 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 MFN1Q8IWA4 741 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 HAPLN3Q96S86 360 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 CHRDQ9H2X0 955 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 TMEM51Q9NW97 253 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 C2orf42Q9NWW7 574 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 PCSK1NQ9UHG2 260 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 ANAPC7Q9UJX3 599 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 TFR2Q9UP52 801 aa20.08■□□□□ 0.81
HDAC4-212ENST00000495497 TYW5A2RUC4 315 aaKnown RBP20.07■□□□□ 0.8
HDAC4-212ENST00000495497 SRGAP2O75044 1071 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 CNTN5O94779 1100 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 HLA-FP30511 346 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 ARL13BQ3SXY8 428 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 C2orf27AQ580R0 203 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 FSCBQ5H9T9 825 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 RABGAP1LQ5R372 815 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 MPP7Q5T2T1 576 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 RNF43Q68DV7 783 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 RAD9BQ6WBX8 426 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 TMEM139Q8IV31 216 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 CCDC170Q8IYT3 715 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 ZNF683Q8IZ20 524 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 PYROXD2Q8N2H3 581 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 RPLP0P6Q8NHW5 317 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 ZNF564Q8TBZ8 553 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-212ENST00000495497 FNIP1Q8TF40 1166 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 C1orf74Q96LT6 269 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 BAG1Q99933 345 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-212ENST00000495497 IRX2Q9BZI1 471 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-212ENST00000495497 OSGEPQ9NPF4 335 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 ABCB8Q9NUT2 735 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 SPATA6Q9NWH7 488 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-212ENST00000495497 GPATCH2LQ9NWQ4 482 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 HCN2Q9UL51 889 aa20.07■□□□□ 0.8
HDAC4-212ENST00000495497 MIA3Q5JRA6 1907 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 E9PAM4 449 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 FAM72CH0Y354 149 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 DESP17661 470 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 CD70P32970 193 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 TIE1P35590 1138 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
HDAC4-212ENST00000495497 MAGEA1P43355 309 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 TNFRSF4P43489 277 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 MTA1Q13330 715 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 FAM72AQ5TYM5 149 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 FAM72DQ6L9T8 149 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 SLFN11Q7Z7L1 901 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 FAM72BQ86X60 149 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 CPNE8Q86YQ8 564 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 SYNPOQ8N3V7 929 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 NTAN1Q96AB6 310 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 PEBP4Q96S96 227 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 SLC2A11Q9BYW1 496 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 FZD10Q9ULW2 581 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 SLC27A6Q9Y2P4 619 aa20.06■□□□□ 0.8
HDAC4-212ENST00000495497 EPN1Q9Y6I3 576 aaPredicted RBP20.06■□□□□ 0.8
HDAC4-212ENST00000495497 ZDBF2Q9HCK1 2354 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 GOLGA6L6A8MZA4 724 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 H0Y626 953 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 LRCH4O75427 683 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 LUC7L3O95232 432 aaKnown RBP20.05■□□□□ 0.8
HDAC4-212ENST00000495497 NDUFA10O95299 355 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms