RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NECTIN4Q96NY8 510 aa16.82■□□□□ 0.28
CBX4-204ENST00000495122 RBM15Q96T37 977 aaKnown RBP eCLIP16.82■□□□□ 0.283e-8■■■■■ 26.8
CBX4-204ENST00000495122 FAM118BQ9BPY3 351 aa16.82■□□□□ 0.28
CBX4-204ENST00000495122 NINJ2Q9NZG7 142 aa16.82■□□□□ 0.28
CBX4-204ENST00000495122 FETUBQ9UGM5 382 aa16.82■□□□□ 0.28
CBX4-204ENST00000495122 NOTCH4Q99466 2003 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 A0A087WUV0 522 aaPredicted RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 MYBPHLA2RUH7 354 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 HHLA1C9JL84 531 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 CLDN5O00501 218 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 SYN3O14994 580 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 ALOX15BO15296 676 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 CHADO15335 359 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 LILRB3O75022 631 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 ZBED1O96006 694 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 IFNB1P01574 187 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 LTFP02788 710 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 SOD2P04179 222 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 PECAM1P16284 738 aaPredicted RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 CHKAP35790 457 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 MTHFRP42898 656 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 MAGEA4P43358 317 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 MAGEA6P43360 314 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 HCAR3P49019 387 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 VPS41P49754 854 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 ARL13BQ3SXY8 428 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 EFHC2Q5JST6 749 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 RARS2Q5T160 578 aaKnown RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 KCTD16Q68DU8 428 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 TRIM67Q6ZTA4 783 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 DCP1BQ8IZD4 617 aaKnown RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 CNPY4Q8N129 248 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 PCDH19Q8TAB3 1148 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 FUBP3Q96I24 572 aaKnown RBP eCLIP16.81■□□□□ 0.28
CBX4-204ENST00000495122 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 RTP3Q9BQQ7 232 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 OXCT2Q9BYC2 517 aaPredicted RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 DHX35Q9H5Z1 703 aaKnown RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 LGALS13Q9UHV8 139 aa16.81■□□□□ 0.28
CBX4-204ENST00000495122 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
CBX4-204ENST00000495122 TMEM221A6NGB7 291 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 E7ESA3 106 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 H7C0C1 242 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 M0R296 226 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CAPN9O14815 690 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 OAZ2O95190 189 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CNPP09543 421 aaKnown RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 HTR7P34969 479 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 RPL22P35268 128 aaKnown RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 MDH1P40925 334 aaKnown RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 OR1G1P47890 313 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 ATP5OP48047 213 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CLCN4P51793 760 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 DEUP1Q05D60 604 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 NR1H3Q13133 447 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 MMRN1Q13201 1228 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 HIF1AQ16665 826 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 PDZD4Q76G19 769 aaPredicted RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 BMP8AQ7Z5Y6 402 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 TDRPQ86YL5 185 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 C12orf76Q8N812 135 aaPredicted RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 NAT8LQ8N9F0 302 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 ZMIZ2Q8NF64 920 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 RIPOR3Q96MK2 946 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CSPG4P5Q96PW8 444 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
CBX4-204ENST00000495122 ACTL7BQ9Y614 415 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 USP3Q9Y6I4 520 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 PTPRDP23468 1912 aa16.8■□□□□ 0.28
CBX4-204ENST00000495122 F8W810 466 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 CDH16O75309 829 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 SPAG6O75602 509 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 BEST1O76090 585 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 SHBGP04278 402 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 URODP06132 367 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 PHBP35232 272 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 IRAK1P51617 712 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
CBX4-204ENST00000495122 SLC45A4Q5BKX6 768 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 PDIK1LQ8N165 341 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 CPT1BQ92523 772 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 QKIQ96PU8 341 aaKnown RBP eCLIP16.79■□□□□ 0.28
CBX4-204ENST00000495122 KCTD15Q96SI1 283 aaPredicted RBP16.79■□□□□ 0.28
CBX4-204ENST00000495122 BRD8Q9H0E9 1235 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 KCNH6Q9H252 994 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 CWC15Q9P013 229 aaKnown RBP16.79■□□□□ 0.28
CBX4-204ENST00000495122 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
CBX4-204ENST00000495122 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
CBX4-204ENST00000495122 MIA3Q5JRA6 1907 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms