RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ZNF778Q96MU6 729 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 FOXP3Q9BZS1 431 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 NACA2Q9H009 215 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 FZD8Q9H461 694 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 DCLRE1BQ9H816 532 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 LTBP4Q8N2S1 1624 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 ASB14A6NK59 587 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 C2CD2LO14523 706 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 ERCC2P18074 760 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 TUBP50607 506 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 LAMC2Q13753 1193 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 GNASQ5JWF2 1037 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 RAB3IL1Q8TBN0 382 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 SREK1Q8WXA9 508 aaKnown RBP13.81□□□□□ -0.2
GPC1-209ENST00000495100 GEMIN8Q9NWZ8 242 aaKnown RBP13.81□□□□□ -0.2
GPC1-209ENST00000495100 PGAP2Q9UHJ9 254 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 A0A096LPK6 155 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 NEMP2A6NFY4 417 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 SRRM3A6NNA2 597 aaPredicted RBP13.81□□□□□ -0.2
GPC1-209ENST00000495100 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 TK2O00142 265 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 PGK1P00558 417 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 POLBP06746 335 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 ABHD2P08910 425 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 ARSAP15289 507 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 SNX16P57768 344 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 MOGSQ13724 837 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 MTMR14Q8NCE2 650 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
GPC1-209ENST00000495100 TEKT4Q8WW24 435 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 EBNA1BP2Q99848 306 aaKnown RBP13.81□□□□□ -0.2
GPC1-209ENST00000495100 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 SFMBT1Q9UHJ3 866 aa13.81□□□□□ -0.2
GPC1-209ENST00000495100 COL4A5P29400 1685 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 M0QZ92 97 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 TM9SF1O15321 606 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PGM3O95394 542 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PSMG1O95456 288 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 ZNF132P52740 706 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 MAP7D1Q3KQU3 841 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PPP1R2P3Q6NXS1 205 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 NOTUMQ6P988 496 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PCDH20Q8N6Y1 951 aaKnown RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 STAP1Q9ULZ2 295 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PLLPQ9Y342 182 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 NCF1BA6NI72 391 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 NCF1CA8MVU1 366 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.2
GPC1-209ENST00000495100 CHRNGP07510 517 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 NCF1P14598 390 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 CPA3P15088 417 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 VHLP40337 213 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 BRCC3P46736 316 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 CYP2R1Q6VVX0 501 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 WDCPQ9H6R7 721 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 ABI2Q9NYB9 513 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 MYOCOSA0A1B0GUC4 107 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 GNAT1P11488 350 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 TAF6P49848 677 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 PRAMEP78395 509 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 STILQ15468 1287 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 DGKDQ16760 1214 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 GALNTL6Q49A17 601 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 SPDYAQ5MJ70 313 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 DCBLD1Q8N8Z6 715 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 DIS3LQ8TF46 1054 aaKnown RBP13.8□□□□□ -0.2
GPC1-209ENST00000495100 HDAC11Q96DB2 347 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 ELMO2Q96JJ3 720 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 FAM8A1Q9UBU6 413 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 VANGL2Q9ULK5 521 aa13.8□□□□□ -0.2
GPC1-209ENST00000495100 MYBPHLA2RUH7 354 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 E7ENQ6 273 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 STX16-NPEPL1H3BU86 382 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
GPC1-209ENST00000495100 MCF2P10911 925 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 NFKB1P19838 968 aa13.79□□□□□ -0.2
GPC1-209ENST00000495100 TKTP29401 623 aaKnown RBP13.79□□□□□ -0.2
GPC1-209ENST00000495100 GRIK1P39086 918 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms