RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CDKAL1Q5VV42 579 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 LYSMD4Q5XG99 296 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 RNF43Q68DV7 783 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 OLFML1Q6UWY5 402 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 SERPINA13PQ6UXR4 307 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 RBM43Q6ZSC3 357 aaKnown RBP11.01□□□□□ -0.65
NELFE-213ENST00000494956 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
NELFE-213ENST00000494956 CHSY1Q86X52 802 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 MFN1Q8IWA4 741 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 ENOX1Q8TC92 643 aaKnown RBP11.01□□□□□ -0.65
NELFE-213ENST00000494956 LMLNQ96KR4 655 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 FAM81BQ96LP2 452 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 NAA15Q9BXJ9 866 aaKnown RBP11.01□□□□□ -0.65
NELFE-213ENST00000494956 GANQ9H2C0 597 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 PRDM16Q9HAZ2 1276 aa11.01□□□□□ -0.65
NELFE-213ENST00000494956 NYNRINQ9P2P1 1898 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 LAMA1P25391 3075 aa11□□□□□ -0.65
NELFE-213ENST00000494956 CDX4O14627 284 aaPredicted RBP11□□□□□ -0.65
NELFE-213ENST00000494956 SART1O43290 800 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 SYNCRIPO60506 623 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 MMEP08473 750 aa11□□□□□ -0.65
NELFE-213ENST00000494956 CYP11B1P15538 503 aa11□□□□□ -0.65
NELFE-213ENST00000494956 TACR2P21452 398 aa11□□□□□ -0.65
NELFE-213ENST00000494956 CTSOP43234 321 aaPredicted RBP11□□□□□ -0.65
NELFE-213ENST00000494956 RNASE9P60153 205 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 CENPCQ03188 943 aa11□□□□□ -0.65
NELFE-213ENST00000494956 NME3Q13232 169 aa11□□□□□ -0.65
NELFE-213ENST00000494956 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
NELFE-213ENST00000494956 STARD3Q14849 445 aa11□□□□□ -0.65
NELFE-213ENST00000494956 OTUD1Q5VV17 481 aaPredicted RBP11□□□□□ -0.65
NELFE-213ENST00000494956 IL31Q6EBC2 164 aa11□□□□□ -0.65
NELFE-213ENST00000494956 NOP9Q86U38 636 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 FAM124AQ86V42 546 aa11□□□□□ -0.65
NELFE-213ENST00000494956 C11orf74Q86VG3 221 aa11□□□□□ -0.65
NELFE-213ENST00000494956 TMPRSS6Q8IU80 811 aa11□□□□□ -0.65
NELFE-213ENST00000494956 APCDD1Q8J025 514 aa11□□□□□ -0.65
NELFE-213ENST00000494956 AHI1Q8N157 1196 aa11□□□□□ -0.65
NELFE-213ENST00000494956 DDX51Q8N8A6 666 aaKnown RBP eCLIP11□□□□□ -0.65
NELFE-213ENST00000494956 HJURPQ8NCD3 748 aaPredicted RBP11□□□□□ -0.65
NELFE-213ENST00000494956 OR2I1PQ8NGU4 316 aa11□□□□□ -0.65
NELFE-213ENST00000494956 SLC20A1Q8WUM9 679 aa11□□□□□ -0.65
NELFE-213ENST00000494956 DDX1Q92499 740 aaKnown RBP11□□□□□ -0.65
NELFE-213ENST00000494956 MYO19Q96H55 970 aa11□□□□□ -0.65
NELFE-213ENST00000494956 HSPA12BQ96MM6 686 aa11□□□□□ -0.65
NELFE-213ENST00000494956 SLC2A13Q96QE2 648 aa11□□□□□ -0.65
NELFE-213ENST00000494956 LHX5Q9H2C1 402 aa11□□□□□ -0.65
NELFE-213ENST00000494956 TMEM245Q9H330 911 aa11□□□□□ -0.65
NELFE-213ENST00000494956 FAM204AQ9H8W3 233 aa11□□□□□ -0.65
NELFE-213ENST00000494956 NLRC4Q9NPP4 1024 aa11□□□□□ -0.65
NELFE-213ENST00000494956 ANLNQ9NQW6 1124 aa11□□□□□ -0.65
NELFE-213ENST00000494956 TMPRSS4Q9NRS4 437 aa11□□□□□ -0.65
NELFE-213ENST00000494956 DDIT4Q9NX09 232 aa11□□□□□ -0.65
NELFE-213ENST00000494956 SNX10Q9Y5X0 201 aa11□□□□□ -0.65
NELFE-213ENST00000494956 CACNA1AO00555 2505 aa11□□□□□ -0.65
NELFE-213ENST00000494956 PCDH15Q96QU1 1955 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 F8VZ95 297 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 GIPC1O14908 333 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 KHNYNO15037 678 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 ZBTB24O43167 697 aaPredicted RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 AP5Z1O43299 807 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 ZNF217O75362 1048 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 GFPT2O94808 682 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 LUC7L3O95232 432 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 APOEP02649 317 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 CFIP05156 583 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 POLR2EP19388 210 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 SDHBP21912 280 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 EEF1GP26641 437 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 CSKP41240 450 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 MAPK8P45983 427 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 TPMTP51580 245 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 LIMK1P53667 647 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 ZNF445P59923 1031 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 CDK17Q00537 523 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 FOXK2Q01167 660 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 SLC6A3Q01959 620 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 NNTQ13423 1086 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 BYSLQ13895 437 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 EIF4HQ15056 248 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 RAB6CQ53S08 254 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 TRNP1Q6NT89 227 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 BEND5Q7L4P6 421 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 PHLDB2Q86SQ0 1253 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 C14orf80Q86SX3 495 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 SYT12Q8IV01 421 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 OR52K2Q8NGK3 314 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 FIBINQ8TAL6 211 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 WFIKKN2Q8TEU8 576 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 CPA5Q8WXQ8 436 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 AZIN2Q96A70 460 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 SIPA1Q96FS4 1042 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 TOE1Q96GM8 510 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
NELFE-213ENST00000494956 GPR174Q9BXC1 333 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 RAB6CQ9H0N0 254 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 PDCL3Q9H2J4 239 aa10.99□□□□□ -0.65
NELFE-213ENST00000494956 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms