RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ARHGEF38Q9NXL2 777 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 STAP1Q9ULZ2 295 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 STARD13Q9Y3M8 1113 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 R4GN57 208 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 DMDP11532 3685 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 SGK1O00141 431 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 KLF8O95600 359 aaPredicted RBP17.73■□□□□ 0.43
SNX17-209ENST00000494893 FECHP22830 423 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 HLA-FP30511 346 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 NBL1P41271 181 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 IRAK1P51617 712 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 MRPS21P82921 87 aaKnown RBP17.73■□□□□ 0.43
SNX17-209ENST00000494893 DEUP1Q05D60 604 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 DMC1Q14565 340 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 MPP7Q5T2T1 576 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 WDR59Q6PJI9 974 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 TMEM92Q6UXU6 159 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 SYT13Q7L8C5 426 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 KIAA0907Q7Z7F0 614 aaPredicted RBP17.73■□□□□ 0.43
SNX17-209ENST00000494893 C14orf80Q86SX3 495 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 CHSY1Q86X52 802 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 LGI2Q8N0V4 545 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 CFAP52Q8N1V2 620 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 ZBTB44Q8NCP5 570 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 CCDC112Q8NEF3 446 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 ZNF830Q96NB3 372 aaPredicted RBP17.73■□□□□ 0.43
SNX17-209ENST00000494893 SLC2A11Q9BYW1 496 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 KCNF1Q9H3M0 494 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 ARHGAP20Q9P2F6 1191 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 MMP17Q9ULZ9 603 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 SNX10Q9Y5X0 201 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 HS3ST4Q9Y661 456 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 VPS13AQ96RL7 3174 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 MYO15AQ9UKN7 3530 aa17.73■□□□□ 0.43
SNX17-209ENST00000494893 SIGLEC16A6NMB1 481 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 ATG13O75143 517 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 PAGE1O75459 146 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 SERPING1P05155 500 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 SLC2A3P11169 496 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 KRT3P12035 628 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 GZMAP12544 262 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 PDGFRAP16234 1089 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 PTPN9P43378 593 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 RPL7AP62424 266 aaKnown RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 ATP11AP98196 1134 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 FBXL22Q6P050 247 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 ZNF683Q8IZ20 524 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNX17-209ENST00000494893 TXNDC5Q8NBS9 432 aaKnown RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 HJURPQ8NCD3 748 aaPredicted RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 CENPIQ92674 756 aaPredicted RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 RNF34Q969K3 372 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 IGSF8Q969P0 613 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 BAG1Q99933 345 aaPredicted RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 DDX50Q9BQ39 737 aaKnown RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 TKTL2Q9H0I9 626 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 IRF2BPLQ9H1B7 796 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 ZNHIT6Q9NWK9 470 aaKnown RBP17.72■□□□□ 0.43
SNX17-209ENST00000494893 STIM2Q9P246 746 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 NENFQ9UMX5 172 aa17.72■□□□□ 0.43
SNX17-209ENST00000494893 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 NRDCO43847 1150 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 LILRB5O75023 590 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 FTLP02792 175 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 ABCB4P21439 1286 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 HOXA6P31267 233 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 CD70P32970 193 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 PLA2G5P39877 138 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 PXNP49023 591 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 FNTBP49356 437 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 CCZ1BP86790 482 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 CCZ1P86791 482 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 OGDHQ02218 1023 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 PREPLQ4J6C6 727 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 TDRD12Q587J7 1177 aaKnown RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 FSCBQ5H9T9 825 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 BRMS1LQ5PSV4 323 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 PLEKHA7Q6IQ23 1121 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 DNAJC24Q6P3W2 148 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ANKS1BQ7Z6G8 1248 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 CIR1Q86X95 450 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 FAM131BQ86XD5 332 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 TMEM139Q8IV31 216 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ZNF513Q8N8E2 541 aaPredicted RBP17.71■□□□□ 0.43
SNX17-209ENST00000494893 ACDQ96AP0 544 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 VCPIP1Q96JH7 1222 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 HHIPQ96QV1 700 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ISCUQ9H1K1 167 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 WDCPQ9H6R7 721 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 CD248Q9HCU0 757 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ABCB8Q9NUT2 735 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ZSCAN32Q9NX65 697 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 ADAMTS1Q9UHI8 967 aa17.71■□□□□ 0.43
SNX17-209ENST00000494893 A0A087X0T9 212 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 RTN2O75298 545 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 F9P00740 461 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 FAM228BP0C875 321 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms