RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 OR6B2Q6IFH4 312 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 MMS22LQ6ZRQ5 1243 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 KIAA0907Q7Z7F0 614 aaPredicted RBP9.96□□□□□ -0.82
MSH5-218ENST00000494646 TAC4Q86UU9 113 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 DEFB106AQ8N104 65 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 DEFB124Q8NES8 71 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 OR2I1PQ8NGU4 316 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 CEP76Q8TAP6 659 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 STK32AQ8WU08 396 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 SLC39A13Q96H72 371 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 SERPINB11Q96P15 392 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 MIR1-1HGQ9H1L0 117 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 MTG2Q9H4K7 406 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 SIX2Q9NPC8 291 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 PLCB1Q9NQ66 1216 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 SAMSN1Q9NSI8 373 aaKnown RBP9.96□□□□□ -0.82
MSH5-218ENST00000494646 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.82
MSH5-218ENST00000494646 XPO7Q9UIA9 1087 aaKnown RBP9.96□□□□□ -0.82
MSH5-218ENST00000494646 TLR6Q9Y2C9 796 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 CHD8Q9HCK8 2581 aa9.96□□□□□ -0.82
MSH5-218ENST00000494646 H0Y626 953 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 SART1O43290 800 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 TRUB2O95900 331 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 ATP5BP06576 529 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 SERPINF2P08697 491 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 CLCN1P35523 988 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 KRT9P35527 623 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 ZNF445P59923 1031 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PTK2Q05397 1052 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 GFPT1Q06210 699 aaPredicted RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 RING1Q06587 406 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PDCLQ13371 301 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 E2F5Q15329 346 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 MAN2A1Q16706 1144 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PTPRNQ16849 979 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PLEKHG6Q3KR16 790 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 MS4A13Q5J8X5 152 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 SYCP2LQ5T4T6 812 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 DCAF12L1Q5VU92 463 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PEAR1Q5VY43 1037 aaPredicted RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 RAP1GAP2Q684P5 730 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 SLC47A2Q86VL8 602 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 MFN1Q8IWA4 741 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 AHI1Q8N157 1196 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 OR2T3Q8NH03 318 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 FIBINQ8TAL6 211 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 WFIKKN2Q8TEU8 576 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 SHC3Q92529 594 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 RNF34Q969K3 372 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 FAM81BQ96LP2 452 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PRICKLE1Q96MT3 831 aaPredicted RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 CPXM1Q96SM3 734 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 DDX50Q9BQ39 737 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 TUBGCP2Q9BSJ2 902 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 NUP58Q9BVL2 599 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 TMEM245Q9H330 911 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 NDST4Q9H3R1 872 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 THAP9Q9H5L6 903 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 PRSS16Q9NQE7 514 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 INTS6Q9UL03 887 aaKnown RBP9.95□□□□□ -0.82
MSH5-218ENST00000494646 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
MSH5-218ENST00000494646 ACACBO00763 2458 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 TMEM131Q92545 1883 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 TYW5A2RUC4 315 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 GTPBP10A4D1E9 387 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 ARHGAP33O14559 1287 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 IRAK2O43187 625 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 APOEP02649 317 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 DLDP09622 509 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 TACR2P21452 398 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 OXTRP30559 389 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 ACSL1P33121 698 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CSKP41240 450 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 DPP6P42658 865 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 RNASE9P60153 205 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 CDK17Q00537 523 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CAMK2GQ13555 558 aaPredicted RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 MIIPQ5JXC2 388 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 WDR45BQ5MNZ6 344 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 MPP7Q5T2T1 576 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 FAM183BPQ6ZVS7 135 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CHSY1Q86X52 802 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CCDC117Q8IWD4 279 aaPredicted RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 FAM114A1Q8IWE2 563 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 APCDD1Q8J025 514 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 MINDY1Q8N5J2 469 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.94□□□□□ -0.82
MSH5-218ENST00000494646 ATP6V0D2Q8N8Y2 350 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 HJURPQ8NCD3 748 aaPredicted RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 C1orf131Q8NDD1 294 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 FOXJ1Q92949 421 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms