RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3CQ6IPX1 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 CRELD2Q6UXH1 353 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 BCDIN3DQ7Z5W3 292 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3Q8IZP1 549 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 OR4N4Q8N0Y3 316 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 CLEC4CQ8WTT0 213 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 OVCA2Q8WZ82 227 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 DAZAP1Q96EP5 407 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 ZNF48Q96MX3 618 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 ADGRE3Q9BY15 652 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 ABHD10Q9NUJ1 306 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 LIN7CQ9NUP9 197 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 ASIC5Q9NY37 505 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 ZBTB1Q9Y2K1 713 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 HEMK1Q9Y5R4 338 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 RRN3P2A6NIE6 340 aa5□□□□□ -1.61
SMC4-224ENST00000494612 GCATO75600 419 aa5□□□□□ -1.61
SMC4-224ENST00000494612 FAM155BO75949 473 aa5□□□□□ -1.61
SMC4-224ENST00000494612 KAT7O95251 611 aa5□□□□□ -1.61
SMC4-224ENST00000494612 IGKV2-30P06310 120 aa5□□□□□ -1.61
SMC4-224ENST00000494612 GRK5P34947 590 aa5□□□□□ -1.61
SMC4-224ENST00000494612 PTGER1P34995 402 aa5□□□□□ -1.61
SMC4-224ENST00000494612 AGTR2P50052 363 aa5□□□□□ -1.61
SMC4-224ENST00000494612 HOXA4Q00056 320 aaPredicted RBP5□□□□□ -1.61
SMC4-224ENST00000494612 SLC12A1Q13621 1099 aa5□□□□□ -1.61
SMC4-224ENST00000494612 KLF9Q13886 244 aaPredicted RBP5□□□□□ -1.61
SMC4-224ENST00000494612 CBFBQ13951 182 aa5□□□□□ -1.61
SMC4-224ENST00000494612 FAM187BQ17R55 369 aa5□□□□□ -1.61
SMC4-224ENST00000494612 TRIM60Q495X7 471 aa5□□□□□ -1.61
SMC4-224ENST00000494612 TTC22Q5TAA0 569 aa5□□□□□ -1.61
SMC4-224ENST00000494612 CEP85Q6P2H3 762 aa5□□□□□ -1.61
SMC4-224ENST00000494612 TMEM65Q6PI78 240 aa5□□□□□ -1.61
SMC4-224ENST00000494612 KIAA1324Q6UXG2 1013 aaKnown RBP5□□□□□ -1.61
SMC4-224ENST00000494612 CYP26C1Q6V0L0 522 aa5□□□□□ -1.61
SMC4-224ENST00000494612 KYAT3Q6YP21 454 aaKnown RBP5□□□□□ -1.61
SMC4-224ENST00000494612 TRIM72Q6ZMU5 477 aa5□□□□□ -1.61
SMC4-224ENST00000494612 ZNF66Q6ZN08 573 aa5□□□□□ -1.61
SMC4-224ENST00000494612 CEP70Q8NHQ1 597 aa5□□□□□ -1.61
SMC4-224ENST00000494612 RSC1A1Q92681 617 aa5□□□□□ -1.61
SMC4-224ENST00000494612 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
SMC4-224ENST00000494612 FAR2Q96K12 515 aa5□□□□□ -1.61
SMC4-224ENST00000494612 CCDC17Q96LX7 622 aa5□□□□□ -1.61
SMC4-224ENST00000494612 FCRL4Q96PJ5 515 aa5□□□□□ -1.61
SMC4-224ENST00000494612 SNX18Q96RF0 628 aa5□□□□□ -1.61
SMC4-224ENST00000494612 PAAF1Q9BRP4 392 aa5□□□□□ -1.61
SMC4-224ENST00000494612 RIC8AQ9NPQ8 531 aa5□□□□□ -1.61
SMC4-224ENST00000494612 GGA3Q9NZ52 723 aa5□□□□□ -1.61
SMC4-224ENST00000494612 GTF2A1LQ9UNN4 478 aa5□□□□□ -1.61
SMC4-224ENST00000494612 LZTS1Q9Y250 596 aa5□□□□□ -1.61
SMC4-224ENST00000494612 RCE1Q9Y256 329 aa5□□□□□ -1.61
SMC4-224ENST00000494612 UBE2J1Q9Y385 318 aaPredicted RBP5□□□□□ -1.61
SMC4-224ENST00000494612 STX16-NPEPL1H3BU86 382 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 STX16O14662 325 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 NKX2-8O15522 239 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 MOSPD3O75425 235 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 HEXIM1O94992 359 aaKnown RBP4.99□□□□□ -1.61
SMC4-224ENST00000494612 LARGE1O95461 756 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 MT-CO3P00414 261 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
SMC4-224ENST00000494612 WDR5P61964 334 aaKnown RBP4.99□□□□□ -1.61
SMC4-224ENST00000494612 CFHR3Q02985 330 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 MTHFD1LQ6UB35 978 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 DCDC5Q6ZRR9 648 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 ZNF804AQ7Z570 1209 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 NEK8Q86SG6 692 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 HERC6Q8IVU3 1022 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 OR52L2PQ8NGH6 319 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D5Q92609 795 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 TRMT61AQ96FX7 289 aaKnown RBP4.99□□□□□ -1.61
SMC4-224ENST00000494612 PYM1Q9BRP8 204 aaKnown RBP4.99□□□□□ -1.61
SMC4-224ENST00000494612 CDCP1Q9H5V8 836 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 PLEKHA2Q9HB19 425 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 BAG5Q9UL15 447 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 FZD4Q9ULV1 537 aa4.99□□□□□ -1.61
SMC4-224ENST00000494612 TCRBV5S1A1TA0A578 114 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 GXYLT2A0PJZ3 443 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 JTBO76095 146 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 SLC3A2P08195 630 aaKnown RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 CPA1P15085 419 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 TAS2R50P59544 299 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 ACTR2P61160 394 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 TUBA4AP68366 448 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 RBM6P78332 1123 aaKnown RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 SLC14A1Q13336 389 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 KCNB1Q14721 858 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 ETFDHQ16134 617 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 CNGA3Q16281 694 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 PROSER3Q2NL68 480 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 FBXO47Q5MNV8 452 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 CC2D1BQ5T0F9 858 aaKnown RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 MORN5Q5VZ52 161 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 PNLDC1Q8NA58 520 aaKnown RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 SPPL3Q8TCT6 385 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 AKAP1Q92667 903 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMC4-224ENST00000494612 STAMQ92783 540 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms