RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CFAP52Q8N1V2 620 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 C3orf20Q8ND61 904 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 USP33Q8TEY7 942 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
UBA3-211ENST00000493957 WNT2BQ93097 391 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 RNF34Q969K3 372 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
UBA3-211ENST00000493957 TRIM5Q9C035 493 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 STIM2Q9P246 746 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 FBXO10Q9UK96 956 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 STAP1Q9ULZ2 295 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.486e-7■■■□□ 14.9
UBA3-211ENST00000493957 ABCA7Q8IZY2 2146 aa12.08□□□□□ -0.48
UBA3-211ENST00000493957 THADAQ6YHU6 1953 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 A0A087X0T9 212 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 A0A0A0MRY4 1105 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 TBC1D3BA6NDS4 549 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 C2CD4BA6NLJ0 364 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 K7ESF4 209 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 MFAP3LO75121 409 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 FTLP02792 175 aaPredicted RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 SERPING1P05155 500 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 FAM228BP0C875 321 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 KRT3P12035 628 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 HNRNPLP14866 589 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBA3-211ENST00000493957 PDGFRAP16234 1089 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 CCR1P32246 355 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 GBP1P32455 592 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 CXCR3P49682 368 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 NUMBP49757 651 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 ZNF75DP51815 510 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 ADKP55263 362 aaKnown RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 TBX2Q13207 712 aaPredicted RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 PPP2R5DQ14738 602 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 MPPE1Q53F39 396 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 ARTNQ5T4W7 220 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 EGFLAMQ63HQ2 1017 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 TMEM215Q68D42 235 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 RNF43Q68DV7 783 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 DNAJC24Q6P3W2 148 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 C14orf80Q86SX3 495 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 FAM131BQ86XD5 332 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 SYNPOQ8N3V7 929 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 ALLCQ8N6M5 410 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 ATP6V0D2Q8N8Y2 350 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 IGSF8Q969P0 613 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 AZIN2Q96A70 460 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 IQCDQ96DY2 449 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 PGAP3Q96FM1 320 aaPredicted RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 BTN2A3PQ96KV6 586 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 MCEEQ96PE7 176 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 XPO6Q96QU8 1125 aaKnown RBP12.07□□□□□ -0.48
UBA3-211ENST00000493957 ACOX2Q99424 681 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBA3-211ENST00000493957 SELENOOQ9BVL4 669 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 MAGEB5Q9BZ81 275 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBA3-211ENST00000493957 ADAMTS1Q9UHI8 967 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 HS3ST4Q9Y661 456 aa12.07□□□□□ -0.48
UBA3-211ENST00000493957 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 CHURC1-FNTBB4DL54 471 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 SGK1O00141 431 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 CCP110O43303 1012 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ADAM23O75077 832 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 PAGE1O75459 146 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
UBA3-211ENST00000493957 CYBBP04839 570 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 HLA-FP30511 346 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
UBA3-211ENST00000493957 CD70P32970 193 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 EIF4A3P38919 411 aaKnown RBP12.06□□□□□ -0.48
UBA3-211ENST00000493957 WASP42768 502 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 CXCL12P48061 93 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
UBA3-211ENST00000493957 NHLH1Q02575 133 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ZNF252P-AS1Q0IIN9 211 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 TRIM14Q14142 442 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 NUMA1Q14980 2115 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 FBXO43Q4G163 708 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ARCQ7LC44 396 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 IL17RCQ8NAC3 791 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 SORCS1Q8WY21 1168 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 HHIPQ96QV1 700 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 DNAJC7Q99615 494 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 CHP1Q99653 195 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 TKTL2Q9H0I9 626 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 KCNH6Q9H252 994 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ABHD10Q9NUJ1 306 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 ARHGEF38Q9NXL2 777 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 RRN3Q9NYV6 651 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms