RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 KIAA1211LQ6NV74 962 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 BZW1Q7L1Q6 419 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 TBC1D1Q86TI0 1168 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 LMNTD2Q8IXW0 634 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 FAM71AQ8IYT1 594 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CAMKK1Q8N5S9 505 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 LMO3Q8TAP4 145 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CSGALNACT1Q8TDX6 532 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 E2F7Q96AV8 911 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 C18orf8Q96DM3 657 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CCDC28BQ9BUN5 200 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 BHMT2Q9H2M3 363 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 SPATS2LQ9NUQ6 558 aaKnown RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 AJAP1Q9UKB5 411 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF462Q96JM2 2506 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 KIAA1549LQ6ZVL6 1849 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 MYO16Q9Y6X6 1858 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 GON4LQ3T8J9 2241 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 CCDC189A1A4V9 331 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TCP11X1B4DZS4 312 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 H0Y626 953 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SMAPO00193 183 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SPOPO43791 374 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TSPAN1O60635 241 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 MOSPD3O75425 235 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 RHOBTB1O94844 696 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TRIM16O95361 564 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 FTLP02792 175 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 ABCB4P21439 1286 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 STX2P32856 288 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 CETN2P41208 172 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 VIPR2P41587 438 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 CASP4P49662 377 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 IFI35P80217 286 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 LAMTOR4Q0VGL1 99 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 LBRQ14739 615 aaKnown RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TSNAXIP1Q2TAA8 658 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 C11orf91Q3C1V1 193 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 NUGGCQ68CJ6 796 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 VSTM1Q6UX27 236 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 EXOC8Q8IYI6 725 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF564Q8TBZ8 553 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TBC1D31Q96DN5 1066 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 STAMBPL1Q96FJ0 436 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 ZSWIM3Q96MP5 696 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 CFAP57Q96MR6 1250 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 TRIM31Q9BZY9 425 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SAR1AQ9NR31 198 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 ABCF3Q9NUQ8 709 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 LARSQ9P2J5 1176 aaKnown RBP11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 LRRC42Q9Y546 428 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 PPME1Q9Y570 386 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 BACE2Q9Y5Z0 518 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 PTPRDP23468 1912 aa11.01□□□□□ -0.65
PDLIM1-205ENST00000493949 SPTA1P02549 2419 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 HECTD1Q9ULT8 2610 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 PTPRBP23467 1997 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 FAM47DPA6NHR8 397 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC38A8A6NNN8 435 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 HEPACAM2A8MVW5 462 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 UPK3BL1B0FP48 263 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 UPK3BL2E5RIL1 263 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 PSTPIP1O43586 416 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 EXOC3O60645 756 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ABLIM3O94929 683 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 LRG1P02750 347 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 BRAFP15056 766 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ATF2P15336 505 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ACADSP16219 412 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 TSHRP16473 764 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 COMTP21964 271 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 FGFR3P22607 806 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SOX9P48436 509 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 PXNP49023 591 aaPredicted RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 EPHA5P54756 1037 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 CREB5Q02930 508 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SPARCL1Q14515 664 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SGO2Q562F6 1265 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 CDCA2Q69YH5 1023 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms