RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZNF234Q14588 700 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 SKOR2Q2VWA4 1001 aaPredicted RBP23.43■■□□□ 1.34
SNIP1-203ENST00000493916 C2CD6Q53TS8 623 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 RAP1GAP2Q684P5 730 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 ADIPOR2Q86V24 386 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 MFN1Q8IWA4 741 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 LGI2Q8N0V4 545 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 RNF34Q969K3 372 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 LMLNQ96KR4 655 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 COX16Q9P0S2 106 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 CALCOCO1Q9P1Z2 691 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 STIM2Q9P246 746 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 TMEM59LQ9UK28 342 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 RAD54BQ9Y620 910 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 MUC22E2RYF6 1773 aaPredicted RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 A0A1W2PQC6 194 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 WASH3PC4AMC7 463 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 F5H5T6 163 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 RHOBTB1O94844 696 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 UNGP13051 313 aaPredicted RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 CD70P32970 193 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 RNASE9P60153 205 aaKnown RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 CENPCQ03188 943 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 BYSLQ13895 437 aaKnown RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 STARD3Q14849 445 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 ELF2Q15723 593 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 ZSCAN23Q3MJ62 389 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 SLC25A52Q3SY17 297 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 TTC39BQ5VTQ0 682 aaPredicted RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 MMS22LQ6ZRQ5 1243 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 CHST9Q7L1S5 443 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 SORCS1Q8WY21 1168 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 SPACA7Q96KW9 195 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 ADAM33Q9BZ11 813 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 PARD6AQ9NPB6 346 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 PIGVQ9NUD9 493 aa23.42■■□□□ 1.34
SNIP1-203ENST00000493916 PTPRZ1P23471 2315 aaPredicted RBP23.42■■□□□ 1.34
SNIP1-203ENST00000493916 FAM170AA1A519 330 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 GOLGA8SH3BPF8 625 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 ZBTB24O43167 697 aaPredicted RBP23.41■■□□□ 1.34
SNIP1-203ENST00000493916 LUC7L3O95232 432 aaKnown RBP23.41■■□□□ 1.34
SNIP1-203ENST00000493916 F9P00740 461 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 CCDC172P0C7W6 258 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 FERP16591 822 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 NDUFV2P19404 249 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 SULT1E1P49888 294 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 TPM4P67936 248 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 ARID5AQ03989 594 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 CDH18Q13634 790 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 CLEC16AQ2KHT3 1053 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 MAP7D1Q3KQU3 841 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 BRMS1LQ5PSV4 323 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 CCDC117Q8IWD4 279 aaPredicted RBP23.41■■□□□ 1.34
SNIP1-203ENST00000493916 CFAP52Q8N1V2 620 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 PGBD3Q8N328 593 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 BAP1Q92560 729 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 NAP1L5Q96NT1 182 aaPredicted RBP23.41■■□□□ 1.34
SNIP1-203ENST00000493916 PCDHB18PQ96TA0 734 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 INVSQ9Y283 1065 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 PCDHGA5Q9Y5G8 931 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 PLXND1Q9Y4D7 1925 aa23.41■■□□□ 1.34
SNIP1-203ENST00000493916 MYO18AQ92614 2054 aaKnown RBP23.4■■□□□ 1.34
SNIP1-203ENST00000493916 SERPINC1P01008 464 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 TFE3P19532 575 aaPredicted RBP23.4■■□□□ 1.34
SNIP1-203ENST00000493916 FLT3P36888 993 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 NSFP46459 744 aaKnown RBP23.4■■□□□ 1.34
SNIP1-203ENST00000493916 CXCR3P49682 368 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 GSCP56915 257 aaPredicted RBP23.4■■□□□ 1.34
SNIP1-203ENST00000493916 SPEM2Q0P670 501 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 LMAN2Q12907 356 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 FUT11Q495W5 492 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 PMS2CLQ68D20 193 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 MBLAC2Q68D91 279 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 BNIPLQ7Z465 357 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 LUZP1Q86V48 1076 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 CARNMT1Q8N4J0 409 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 SLC30A5Q8TAD4 765 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 TBCBQ99426 244 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 ARHGEF38Q9NXL2 777 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 PAXBP1Q9Y5B6 917 aa23.4■■□□□ 1.34
SNIP1-203ENST00000493916 ATP5BP06576 529 aaKnown RBP23.39■■□□□ 1.33
SNIP1-203ENST00000493916 DLDP09622 509 aaKnown RBP23.39■■□□□ 1.33
SNIP1-203ENST00000493916 BCKDHBP21953 392 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 PRKCHP24723 683 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 PTP4A2Q12974 167 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 NR1I3Q14994 352 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 CSRP2Q16527 193 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 PTPRNQ16849 979 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 RABGAP1LQ5R372 815 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 TRNP1Q6NT89 227 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 SERPINA13PQ6UXR4 307 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 SND1Q7KZF4 910 aaKnown RBP eCLIP23.39■■□□□ 1.33
SNIP1-203ENST00000493916 PHF13Q86YI8 300 aaPredicted RBP23.39■■□□□ 1.33
SNIP1-203ENST00000493916 RLN3Q8WXF3 142 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 TTC17Q96AE7 1141 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 MRGPRX1Q96LB2 322 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 AGPAT1Q99943 283 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 C11orf70Q9BRQ4 267 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 TMEM245Q9H330 911 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 SEMA4GQ9NTN9 838 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms