RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 CCT6BQ92526 530 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 MTBPQ96DY7 904 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 TKTL2Q9H0I9 626 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 KIF9Q9HAQ2 790 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 TRHDEQ9UKU6 1024 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 CCT8L1PA6NM43 557 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ERI2A8K979 691 aaKnown RBP11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM72CH0Y354 149 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 INHAP05111 366 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ITGB1P05556 798 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 RPA3P35244 121 aaPredicted RBP11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SERPINB9P50453 376 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 RABGGTBP53611 331 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SLC18A2Q05940 514 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 GALNT2Q10471 571 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 NAB1Q13506 487 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM72AQ5TYM5 149 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM72DQ6L9T8 149 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ZNF449Q6P9G9 518 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 UNC5AQ6ZN44 842 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM72BQ86X60 149 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 CCNYQ8ND76 341 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 EDEM1Q92611 657 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 RASSF4Q9H2L5 321 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SMOC2Q9H3U7 446 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ANLNQ9NQW6 1124 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 OR12D3Q9UGF7 316 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SDR42E2A6NKP2 422 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM159BA6NKW6 160 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 I6L893 689 aaPredicted RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 IRAK2O43187 625 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ALADP13716 330 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 CNTFP26441 200 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 SLC5A3P53794 718 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 COG7P83436 770 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 MTM1Q13496 603 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 PLAC1Q9HBJ0 212 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ARL2BPQ9Y2Y0 163 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ALDH1A2O94788 518 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 DDHD2O94830 711 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 GSTA1P08263 222 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 SNRPAP09012 282 aaKnown RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 SELPP16109 830 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 IBSPP21815 317 aaPredicted RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 FOXN2P32314 431 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 BFSP2Q13515 415 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 SEPT7Q16181 437 aaKnown RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 BTBD8Q5XKL5 378 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ITPRIPL1Q6GPH6 555 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRC8DQ7L1W4 858 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 C10orf67Q8IYJ2 551 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ZNF567Q8N184 647 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 APOPT1Q96IL0 206 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 FAM193BQ96PV7 902 aaPredicted RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 MKS1Q9NXB0 559 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 STARD13Q9Y3M8 1113 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 TRIM66O15016 1216 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 KRT38O76015 456 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 PTPN3P26045 913 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 HOXC13P31276 330 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 GRIK1P39086 918 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 MAGEA11P43364 429 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 PPP2R5DQ14738 602 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 ARHGAP18Q8N392 663 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 GBP7Q8N8V2 638 aaPredicted RBP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 PITPNM3Q9BZ71 974 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 VPS11Q9H270 941 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 MOCS1Q9NZB8 636 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 MAD1L1Q9Y6D9 718 aa11.1□□□□□ -0.63
PHACTR4-204ENST00000493669 FGF10O15520 208 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 TRPA1O75762 1119 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 LRIG2O94898 1065 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PGAM1P18669 254 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PSMB4P28070 264 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 EPHB2P29323 1055 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 GARSP41250 739 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms