RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GIMAP8Q8ND71 665 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 JPH3Q8WXH2 748 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SEC14L1Q92503 715 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 NSUN4Q96CB9 384 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 HES6Q96HZ4 224 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 C7orf26Q96N11 449 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RANBP9Q96S59 729 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SLC29A1Q99808 456 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 BRIP1Q9BX63 1249 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 POLR1BQ9H9Y6 1135 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SNX8Q9Y5X2 465 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SBF1O95248 1867 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 LOC100653049A0A140TA62 436 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 KRT34O76011 436 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PROCP04070 461 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ICAM2P13598 275 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 BMPR1AP36894 532 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GYG1P46976 350 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 OR3A3P47888 321 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SLC26A2P50443 739 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RPS6P62753 249 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PKN2Q16513 984 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SBK1Q52WX2 424 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RALGPS1Q5JS13 557 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ATG16L1Q676U5 607 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 UGT3A1Q6NUS8 523 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 DCUN1D2Q6PH85 259 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RASGRP4Q8TDF6 673 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 MTG1Q9BT17 334 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 IDI2Q9BXS1 227 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 MROQ9BYG7 248 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SPC25Q9HBM1 224 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 IPPQ9Y573 584 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 DGKBQ9Y6T7 804 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PVALEFA0A1B0GWK0 134 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 B4E1Z4 1266 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PDPK1O15530 556 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 IFNA14P01570 189 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PKLRP30613 574 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 NT5C2P49902 561 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CLCQ05315 142 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 STAT4Q14765 748 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SPCS2Q15005 226 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 UBE2SQ16763 222 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MIIPQ5JXC2 388 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 LYPD8Q6UX82 237 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CENPUQ71F23 418 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 FKBP9P1Q75LS8 142 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 GLRX5Q86SX6 157 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SHKBP1Q8TBC3 707 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 B3GALT6Q96L58 329 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 KATNAL1Q9BW62 490 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TRIM15Q9C019 465 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ABCB10Q9NRK6 738 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 GRID1Q9ULK0 1009 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MAGEB16A2A368 324 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PDZK1P1A8MUH7 402 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ANKRD63C9JTQ0 380 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 H3BMQ9 156 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DYRK3O43781 588 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 NOS1APO75052 506 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ATF2P15336 505 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 RRM2P31350 389 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 POLR2GP62487 172 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 RTN1Q16799 776 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 HMBOX1Q6NT76 420 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 AADACL2Q6P093 401 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 HPS6Q86YV9 775 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ARID3BQ8IVW6 561 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 RTKN2Q8IZC4 609 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DEFB107AQ8IZN7 70 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 UBL4BQ8N7F7 174 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 C4orf32Q8N8J7 132 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ASB12Q8WXK4 309 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 COG8Q96MW5 612 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 C12orf65Q9H3J6 166 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 RPF2Q9H7B2 306 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 RMND5AQ9H871 391 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MCCC2Q9HCC0 563 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TCF7L2Q9NQB0 619 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 FAM105AQ9NUU6 356 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 IQANK1A0A1B0GTG1 560 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DCAF8L1A6NGE4 600 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PRR5-ARHGAP8B1AHC4 643 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TOR1BO14657 336 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PLSCR1O15162 318 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 NCAM2O15394 837 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MAGEB2O15479 319 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms