RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FAM47BQ8NA70 645 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM216Q9P0N5 145 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 PRPF19Q9UMS4 504 aaKnown RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 NR2E3Q9Y5X4 410 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 GIPC1O14908 333 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 KRT7P08729 469 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 GRIA1P42261 906 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 ESRRGP62508 458 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 JAG1P78504 1218 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 CYP2A13Q16696 494 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 EGFLAMQ63HQ2 1017 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM214Q6NUQ4 689 aaKnown RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 EPGNQ6UW88 154 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 C16orf89Q6UX73 402 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM110Q86TL2 294 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 FIBCD1Q8N539 461 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 TBC1D15Q8TC07 691 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 CIB1Q99828 191 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 CLK4Q9HAZ1 481 aaKnown RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 STAM2O75886 525 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 CAPNS1P04632 268 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 PRKCGP05129 697 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 ME2P23368 584 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 C6orf183Q5T699 404 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 GPAT2Q6NUI2 795 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 C15orf52Q6ZUT6 534 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 SNX27Q96L92 541 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF597Q96LX8 424 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 RIT2Q99578 217 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 HIPK3Q9H422 1215 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 VPS45Q9NRW7 570 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 PNPLA3Q9NST1 481 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 SNX13Q9Y5W8 968 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 RGSL1A5PLK6 1076 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 FAM159BA6NKW6 160 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 KRT3P12035 628 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 BMXP51813 675 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 NLRP11P59045 1033 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 GPR107Q5VW38 600 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 LYSMD3Q7Z3D4 306 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 CASP10Q92851 521 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 APBB2Q92870 758 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 TMA16Q96EY4 203 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 ACO2Q99798 780 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 FERMT1Q9BQL6 677 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 FRMD8P1Q9BZ68 369 aaPredicted RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 NARFQ9UHQ1 456 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 SOBPA7XYQ1 873 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 BCAS2O75934 225 aaPredicted RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 SEC24DO94855 1032 aaPredicted RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 CKMT2P17540 419 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 GRK2P25098 689 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 TCF7P36402 384 aaPredicted RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 MAPK10P53779 464 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 PRKG1Q13976 671 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 HADHQ16836 314 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 ZBED5Q49AG3 693 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 NAPRTQ6XQN6 538 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF786Q8N393 782 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 MARK4Q96L34 752 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 OSBPL11Q9BXB4 747 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 NAA50Q9GZZ1 169 aaKnown RBP12□□□□□ -0.49
HDAC4-210ENST00000493582 PCDHAC1Q9H158 963 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 WDR41Q9HAD4 459 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 CXorf21Q9HAI6 301 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 COPG2Q9UBF2 871 aa12□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 ACOT8O14734 319 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 GNAO1P09471 354 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 CCDC130P13994 396 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 RBL1P28749 1068 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 ETFBP38117 255 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 CRADDP78560 199 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 MTX3Q5HYI7 312 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM198Q66K66 360 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 SETD3Q86TU7 594 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 SIGLEC10Q96LC7 697 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 RPF2Q9H7B2 306 aaKnown RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 RBAKQ9NYW8 714 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 F5H423 210 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 H3BMQ9 156 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 GLRA3O75311 464 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 BMP10O95393 424 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 HSPA4LO95757 839 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 HARS2P49590 506 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms