RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TSPY26PQ9H489 355 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 CAPN10Q9HC96 672 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 ZFP14Q9HCL3 533 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 CNGB3Q9NQW8 809 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 KRT82Q9NSB4 513 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 AIPL1Q9NZN9 384 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 DUSP12Q9UNI6 340 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 C2orf16Q68DN1 1984 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 DOPEY2Q9Y3R5 2298 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 CREBBPQ92793 2442 aa7.07□□□□□ -1.28
VPS52-219ENST00000493379 NBPF19A0A087WUL8 3843 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ITIH6Q6UXX5 1313 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 LAMA1P25391 3075 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 A0A1W2PQJ5 194 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 J3QKU1 62 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 TULP2O00295 520 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 CYP26A1O43174 497 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 GREM1O60565 184 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SRFP11831 508 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 MYL4P12829 197 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 CYP11B1P15538 503 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 GJA1P17302 382 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ADORA2BP29275 332 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 HNRNPH3P31942 346 aaKnown RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 SOX5P35711 763 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 PRKCIP41743 596 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ACADSBP45954 432 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 GABRB2P47870 512 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 PGFP49763 221 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 KLK7P49862 253 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 UBASH3AP57075 661 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SLC8A3P57103 927 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 POLR2FP61218 127 aaKnown RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 ZXDBP98169 803 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ZNF252P-AS1Q0IIN9 211 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 HYAL2Q12891 473 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 FILIP1LQ4L180 1135 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ARHGAP15Q53QZ3 475 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 STXBP5Q5T5C0 1151 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 TXNDC8Q6A555 127 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 TANGO2Q6ICL3 276 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ARCQ7LC44 396 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 GPRIN1Q7Z2K8 1008 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SCD5Q86SK9 330 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SLC47A2Q86VL8 602 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 FMNL3Q8IVF7 1028 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 CELF5Q8N6W0 485 aaKnown RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 ZNF513Q8N8E2 541 aaPredicted RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 OLIG1Q8TAK6 271 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ZSCAN18Q8TBC5 510 aaPredicted RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 DEPDC1BQ8WUY9 529 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 IRGQQ8WZA9 623 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SYN2Q92777 582 aaPredicted RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 RSPRY1Q96DX4 576 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 TCF12Q99081 682 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 FAM83CQ9BQN1 747 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ANP32EQ9BTT0 268 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 MED10Q9BTT4 135 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 NUP58Q9BVL2 599 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 PLA2G2FQ9BZM2 168 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 RNF38Q9H0F5 515 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 KIF9Q9HAQ2 790 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ACP6Q9NPH0 428 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 TDP1Q9NUW8 608 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS52-219ENST00000493379 SPATA6Q9NWH7 488 aaPredicted RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 OSER1Q9NX31 292 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 HESX1Q9UBX0 185 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 CYTH4Q9UIA0 394 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 NOCTQ9UK39 431 aaKnown RBP7.06□□□□□ -1.28
VPS52-219ENST00000493379 ARHGAP26Q9UNA1 814 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 PCDHGA2Q9Y5H1 932 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 NUMBLQ9Y6R0 609 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 ACACAQ13085 2346 aa7.06□□□□□ -1.28
VPS52-219ENST00000493379 GREB1Q4ZG55 1949 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 APC2O95996 2303 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 C2orf78A6NCI8 922 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 SHISA7A6NL88 538 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GOLGA6L19H0YKK7 550 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CHADO15335 359 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 FBXO21O94952 628 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 LSM8O95777 96 aaKnown RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 ZBED1O96006 694 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CYP1A1P04798 512 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 FYNP06241 537 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GLI1P08151 1106 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 UNGP13051 313 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 ACPPP15309 386 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CD19P15391 556 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CHRNB2P17787 502 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 PSMC3P17980 439 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 HDCP19113 662 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 GBP2P32456 591 aaPredicted RBP7.05□□□□□ -1.28
VPS52-219ENST00000493379 STAT1P42224 750 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 TKTL1P51854 596 aa7.05□□□□□ -1.28
VPS52-219ENST00000493379 CDR1P51861 262 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms