RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 OBP2AQ9NY56 170 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 ZNF510Q9Y2H8 683 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 HS3ST4Q9Y661 456 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 MYO15AQ9UKN7 3530 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 SLC9A3R1O14745 358 aaPredicted RBP17.78■□□□□ 0.44
LIME1-208ENST00000493265 GALR2O43603 387 aaPredicted RBP17.78■□□□□ 0.44
LIME1-208ENST00000493265 ARSAP15289 507 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TCF3P15923 654 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TACR2P21452 398 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 SLC6A4P31645 630 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 MARCKSL1P49006 195 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 PPP6R3Q5H9R7 873 aaPredicted RBP17.78■□□□□ 0.44
LIME1-208ENST00000493265 ADGRF1Q5T601 910 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TPGS1Q6ZTW0 290 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 CYP4V2Q6ZWL3 525 aaPredicted RBP17.78■□□□□ 0.44
LIME1-208ENST00000493265 C14orf80Q86SX3 495 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 RHOT1Q8IXI2 618 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 LGI2Q8N0V4 545 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TMEM105Q8N8V8 129 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TRIM58Q8NG06 486 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 OSCP1Q8WVF1 389 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 NTAN1Q96AB6 310 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TRMT61BQ9BVS5 477 aaKnown RBP17.78■□□□□ 0.44
LIME1-208ENST00000493265 EBF3Q9H4W6 596 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TMEM51Q9NW97 253 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 VANGL2Q9ULK5 521 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 CFAP54Q96N23 3096 aa17.78■□□□□ 0.44
LIME1-208ENST00000493265 FAM72CH0Y354 149 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 CREB3O43889 395 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 KRT1P04264 644 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 KRT7P08729 469 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 TNK2Q07912 1038 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 AUHQ13825 339 aaKnown RBP17.77■□□□□ 0.44
LIME1-208ENST00000493265 KRT81Q14533 505 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 BOLA3Q53S33 107 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 FAM133BQ5BKY9 247 aaKnown RBP17.77■□□□□ 0.44
LIME1-208ENST00000493265 FAM72AQ5TYM5 149 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 FAM72DQ6L9T8 149 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 FAM72BQ86X60 149 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 SLC35F6Q8N357 371 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 KCTD6Q8NC69 237 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 DEPDC1BQ8WUY9 529 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 KRT35Q92764 455 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 KCTD15Q96SI1 283 aaPredicted RBP17.77■□□□□ 0.44
LIME1-208ENST00000493265 DDX50Q9BQ39 737 aaKnown RBP17.77■□□□□ 0.44
LIME1-208ENST00000493265 BRD9Q9H8M2 597 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 OR12D3Q9UGF7 316 aa17.77■□□□□ 0.44
LIME1-208ENST00000493265 F5H5T6 163 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 LATS1O95835 1130 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 AIF1P55008 147 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
LIME1-208ENST00000493265 CDH6P55285 790 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 GNG11P61952 73 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 SCAPQ12770 1279 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 ANO4Q32M45 955 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 RWDD4Q6NW29 188 aaKnown RBP17.76■□□□□ 0.43
LIME1-208ENST00000493265 CIR1Q86X95 450 aaPredicted RBP17.76■□□□□ 0.43
LIME1-208ENST00000493265 CFAP52Q8N1V2 620 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 SLC44A3Q8N4M1 653 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 TEKT4Q8WW24 435 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 AZIN2Q96A70 460 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 MYEOVQ96EZ4 313 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 RPRD1AQ96P16 312 aaPredicted RBP17.76■□□□□ 0.43
LIME1-208ENST00000493265 MFSD1Q9H3U5 465 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 PLK2Q9NYY3 685 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 STIM2Q9P246 746 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
LIME1-208ENST00000493265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.76■□□□□ 0.43
LIME1-208ENST00000493265 LRRD1A4D1F6 860 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 E9PAM4 449 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 L1CAMP32004 1257 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 CHKAP35790 457 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 SGSHP51688 502 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 NUBP1P53384 320 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 MTA1Q13330 715 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 PDGFRLQ15198 375 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 EML3Q32P44 896 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 LY6G5CQ5SRR4 150 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 FBXL22Q6P050 247 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 LRRC31Q6UY01 552 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 TMEM25Q86YD3 366 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 DDI1Q8WTU0 396 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 CD101Q93033 1021 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 IGSF8Q969P0 613 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 RNF25Q96BH1 459 aaPredicted RBP17.75■□□□□ 0.43
LIME1-208ENST00000493265 OTUB2Q96DC9 234 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 EPAS1Q99814 870 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 PRMT1Q99873 361 aaKnown RBP17.75■□□□□ 0.43
LIME1-208ENST00000493265 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 OSBPL2Q9H1P3 480 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 SPHK2Q9NRA0 654 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
LIME1-208ENST00000493265 NEDD8-MDP1E9PL57 170 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 ENC1O14682 589 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms