RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RAB6CQ53S08 254 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 ZFYVE27Q5T4F4 411 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 OTUD1Q5VV17 481 aaPredicted RBP13.92□□□□□ -0.18
MSH6-208ENST00000493177 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 FAM131BQ86XD5 332 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 SLC35F6Q8N357 371 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 LRRC57Q8N9N7 239 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 RNF38Q9H0F5 515 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 RAB6CQ9H0N0 254 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 ZWILCHQ9H900 591 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 PIGVQ9NUD9 493 aa13.92□□□□□ -0.18
MSH6-208ENST00000493177 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 PRR23AA6NEV1 266 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 SHISA7A6NL88 538 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 PROB1E7EW31 1015 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 LRCH4O75427 683 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 APOEP02649 317 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 MIPP30301 263 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 PCK1P35558 622 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 CXCL12P48061 93 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 DNA2P51530 1060 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 NRLP54845 237 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 HDAC4P56524 1084 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 SLC7A9P82251 487 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 COG7P83436 770 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 ZC3H12AQ5D1E8 599 aaKnown RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 ASCL5Q7RTU5 278 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 CENPIQ92674 756 aaPredicted RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 C16orf45Q96MC5 204 aaPredicted RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 P2RY13Q9BPV8 354 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 ADAM33Q9BZ11 813 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 SEMA4AQ9H3S1 761 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 WDCPQ9H6R7 721 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 CFAP97Q9P2B7 532 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 TLR6Q9Y2C9 796 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 HBS1LQ9Y450 684 aaKnown RBP13.91□□□□□ -0.18
MSH6-208ENST00000493177 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
MSH6-208ENST00000493177 SCAMP3O14828 347 aaKnown RBP13.9□□□□□ -0.18
MSH6-208ENST00000493177 ENDOD1O94919 500 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
MSH6-208ENST00000493177 IGLV3-25P01717 112 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
MSH6-208ENST00000493177 TCF3P15923 654 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 CCR1P32246 355 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 GJA4P35212 333 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 TAS2R40P59535 323 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 NNTQ13423 1086 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 FZD5Q13467 585 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 EML3Q32P44 896 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 ARL13BQ3SXY8 428 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 SLFN11Q7Z7L1 901 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 NT5DC3Q86UY8 548 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 SPEM1Q8N4L4 309 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 ARFGAP1Q8N6T3 406 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 CD101Q93033 1021 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 KLF16Q9BXK1 252 aaPredicted RBP13.9□□□□□ -0.18
MSH6-208ENST00000493177 TMEM51Q9NW97 253 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 ZSCAN32Q9NX65 697 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 USP18Q9UMW8 372 aa13.9□□□□□ -0.18
MSH6-208ENST00000493177 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
MSH6-208ENST00000493177 ESPNB1AK53 854 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 OLFM2O95897 454 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 SLC2A3P11169 496 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 TCF4P15884 667 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 DRD1P21728 446 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 CXCR3P49682 368 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 SATB1Q01826 763 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 SMTNL2Q2TAL5 461 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 BRMS1LQ5PSV4 323 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 Q6ZS52 159 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 BNIPLQ7Z465 357 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 MAML2Q8IZL2 1156 aaPredicted RBP13.89□□□□□ -0.19
MSH6-208ENST00000493177 SYNPOQ8N3V7 929 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 ATP6V0D2Q8N8Y2 350 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 HSPH1Q92598 858 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 FCRL2Q96LA5 508 aaPredicted RBP13.89□□□□□ -0.19
MSH6-208ENST00000493177 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 TKTL2Q9H0I9 626 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 LINC00597Q9H2U6 94 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 PRMT8Q9NR22 394 aaPredicted RBP13.89□□□□□ -0.19
MSH6-208ENST00000493177 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH6-208ENST00000493177 TBC1D14Q9P2M4 693 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms