RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 PDZD4Q76G19 769 aaPredicted RBP21.73■■□□□ 1.07
CCDC88B-208ENST00000492980 LRRC8CQ8TDW0 803 aa21.73■■□□□ 1.07
CCDC88B-208ENST00000492980 TKTL2Q9H0I9 626 aa21.73■■□□□ 1.07
CCDC88B-208ENST00000492980 SLC17A7Q9P2U7 560 aa21.73■■□□□ 1.07
CCDC88B-208ENST00000492980 SNX10Q9Y5X0 201 aa21.73■■□□□ 1.07
CCDC88B-208ENST00000492980 MYO18AQ92614 2054 aaKnown RBP21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 FAM159BA6NKW6 160 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 NEK3P51956 506 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 TSPY1Q01534 308 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 MBTPS1Q14703 1052 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 LRRC8BQ6P9F7 803 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 TRMT10BQ6PF06 316 aaKnown RBP21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 NPWQ8N729 165 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 APOPT1Q96IL0 206 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 TRPV6Q9H1D0 765 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 IGSF9Q9P2J2 1179 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 PHTF1Q9UMS5 762 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 STARD13Q9Y3M8 1113 aa21.72■■□□□ 1.07
CCDC88B-208ENST00000492980 ARHGEF37A1IGU5 675 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 CSH1P0DML2 217 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 CSH2P0DML3 217 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 DQX1Q8TE96 717 aaKnown RBP21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 LINC01599Q8WXQ3 324 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 PLCD4Q9BRC7 762 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 C12orf65Q9H3J6 166 aaKnown RBP21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 SLCO1B3Q9NPD5 702 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 PCDHB8Q9UN66 801 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 SLC12A4Q9UP95 1085 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 TRIM49D1C9J1S8 452 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 UGT1A9O60656 530 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 LPXNO60711 386 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 EDF1O60869 148 aaKnown RBP21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 ALADP13716 330 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 SEPT7Q16181 437 aaKnown RBP21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 STEAP4Q687X5 459 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 PACS2Q86VP3 889 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 ZNF276Q8N554 614 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 SCAMP5Q8TAC9 235 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 ZNF75CPQ92670 426 aaPredicted RBP21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 STAMBPL1Q96FJ0 436 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 GLT1D1Q96MS3 346 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 UGT1A7Q9HAW7 530 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 UGT1A10Q9HAW8 530 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 UGT1A8Q9HAW9 530 aa21.71■■□□□ 1.07
CCDC88B-208ENST00000492980 H0YHG0 523 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 KCNK1O00180 336 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 ZNF189O75820 626 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 DDHD2O94830 711 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 IGLV3-25P01717 112 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 GSTA1P08263 222 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 SNRPAP09012 282 aaKnown RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 PYGBP11216 843 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 PTPN3P26045 913 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 ZNF135P52742 658 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 PPIDQ08752 370 aaKnown RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 TTC31Q49AM3 519 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 CLLU1OSQ5K130 101 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 GLB1LQ6UWU2 654 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 ZNF280BQ86YH2 543 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 EPAS1Q99814 870 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 OR12D3Q9UGF7 316 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 WDR27A2RRH5 827 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 NCAM2O15394 837 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 KRT37O76014 449 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 EOMESO95936 686 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 YWHAHQ04917 246 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 DSC1Q08554 894 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 IFRD2Q12894 506 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 BEND5Q7L4P6 421 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 SPATA2LQ8IUW3 424 aaPredicted RBP21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 CNPY4Q8N129 248 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 CD99L2Q8TCZ2 262 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 RMDN2Q96LZ7 410 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 TRIM62Q9BVG3 475 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 MOCS1Q9NZB8 636 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 GGT7Q9UJ14 662 aa21.7■■□□□ 1.06
CCDC88B-208ENST00000492980 MOXD2PA6NHM9 499 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 SDR42E2A6NKP2 422 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 LRIG2O94898 1065 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 MGAT5Q09328 741 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 FBXW10Q5XX13 1052 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 RNF43Q68DV7 783 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 SLC24A5Q71RS6 500 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 PID1Q7Z2X4 250 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 CCDC63Q8NA47 563 aa21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 OXNAD1Q96HP4 312 aaPredicted RBP21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 KLHL8Q9P2G9 620 aaPredicted RBP21.69■■□□□ 1.06
CCDC88B-208ENST00000492980 HTTP42858 3142 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 DHRS4L1P0CG22 281 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 ETV4P43268 484 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 SLC5A3P53794 718 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 CRADDP78560 199 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 GALNT2Q10471 571 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 EIF4EBP2Q13542 120 aaPredicted RBP21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 LGSNQ5TDP6 509 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 C4orf50Q6ZRC1 276 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 CYS1Q717R9 158 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 GORASP1Q9BQQ3 440 aa21.68■■□□□ 1.06
CCDC88B-208ENST00000492980 VPS11Q9H270 941 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms