RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 FLNBO75369 2602 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 KNL1Q8NG31 2342 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 SHROOM3Q8TF72 1996 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 RRP8O43159 456 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 ACTN4O43707 911 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 RNASEH1O60930 286 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 ITGAVP06756 1048 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 JUPP14923 745 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 EIF2S3P41091 472 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 RAD23BP54727 409 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 ST8SIA6P61647 398 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 KRT39Q6A163 491 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 GANCQ8TET4 914 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 BAP1Q92560 729 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 PAGE5Q96GU1 130 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 SLC6A18Q96N87 628 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 IPO9Q96P70 1041 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 PRORYQ9H606 182 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 MMRN2Q9H8L6 949 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 CISHQ9NSE2 258 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 FZD4Q9ULV1 537 aa11.46□□□□□ -0.57
SND1-215ENST00000492772 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
SND1-215ENST00000492772 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 IRAK2O43187 625 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 ASLP04424 464 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 RPL13P26373 211 aaKnown RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 ITPKBP27987 946 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 EPHA8P29322 1005 aaPredicted RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 PSMC2P35998 433 aaKnown RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 ARRB1P49407 418 aaPredicted RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 ACADVLP49748 655 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 MXI1P50539 228 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 ADIGQ0VDE8 80 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 BST2Q10589 180 aaKnown RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 RTP5Q14D33 572 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 NUGGCQ68CJ6 796 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 ATL3Q6DD88 541 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 GATAD2AQ86YP4 633 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 OXR1Q8N573 874 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 FBXL13Q8NEE6 735 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 OR2T34Q8NGX1 318 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 SNIP1Q8TAD8 396 aaKnown RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 SAP25Q8TEE9 199 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 CCDC47Q96A33 483 aaKnown RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 FCRL3Q96P31 734 aaPredicted RBP11.45□□□□□ -0.58
SND1-215ENST00000492772 GDF3Q9NR23 364 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 AASDHPPTQ9NRN7 309 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 ABCC13Q9NSE7 274 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 FBXL12Q9NXK8 326 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 HESX1Q9UBX0 185 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 ADAMTS1Q9UHI8 967 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 SFMBT1Q9UHJ3 866 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 USP25Q9UHP3 1055 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 AK5Q9Y6K8 562 aa11.45□□□□□ -0.58
SND1-215ENST00000492772 TYW5A2RUC4 315 aaKnown RBP11.44□□□□□ -0.58
SND1-215ENST00000492772 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
SND1-215ENST00000492772 TLX3O43711 291 aaPredicted RBP11.44□□□□□ -0.58
SND1-215ENST00000492772 STX10O60499 249 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 TBL1XO60907 577 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 C1QL1O75973 258 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 PRB1P04280 392 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SETSIPP0DME0 302 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 CD38P28907 300 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 CD70P32970 193 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SLC11A2P49281 568 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 CCR5P51681 352 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SGSHP51688 502 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 GALCP54803 685 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SEMG2Q02383 582 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 ILKQ13418 452 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 CST6Q15828 149 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 HNRNPA1L2Q32P51 320 aaKnown RBP11.44□□□□□ -0.58
SND1-215ENST00000492772 SGO2Q562F6 1265 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SLC45A4Q5BKX6 768 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 HES3Q5TGS1 186 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 BSPRYQ5W0U4 402 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 MSANTD2Q6P1R3 559 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 NCEH1Q6PIU2 408 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 MFN1Q8IWA4 741 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 UNC45BQ8IWX7 931 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 SCML4Q8N228 414 aa11.44□□□□□ -0.58
SND1-215ENST00000492772 KDM1BQ8NB78 822 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms