RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 DEUP1Q05D60 604 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 CBLBQ13191 982 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 FYB2Q5VWT5 728 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 GSDMBQ8TAX9 411 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 SMOQ99835 787 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 KCNK13Q9HB14 408 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 PCMTD2Q9NV79 361 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 FAM159BA6NKW6 160 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 KCNK1O00180 336 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 GABRDO14764 452 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 F7P08709 466 aaPredicted RBP13.24□□□□□ -0.29
PRAME-213ENST00000492657 USP17L7P0C7H9 530 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 MGAT1P26572 445 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 PRKD1Q15139 912 aaPredicted RBP13.24□□□□□ -0.29
PRAME-213ENST00000492657 PAN2Q504Q3 1202 aaKnown RBP13.24□□□□□ -0.29
PRAME-213ENST00000492657 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 LONP2Q86WA8 852 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 ZMIZ2Q8NF64 920 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 SLC7A6OSQ96CW6 309 aaPredicted RBP13.24□□□□□ -0.29
PRAME-213ENST00000492657 HEY2Q9UBP5 337 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 ZFP69BQ9UJL9 534 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 PLLPQ9Y342 182 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
PRAME-213ENST00000492657 CASTOR2A6NHX0 329 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 C2CD2LO14523 706 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 DCTN3O75935 186 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 TROVE2P10155 538 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRAME-213ENST00000492657 GMPRP36959 345 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 C11orf91Q3C1V1 193 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 EDEM1Q92611 657 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
PRAME-213ENST00000492657 FBXO6Q9NRD1 293 aaPredicted RBP13.23□□□□□ -0.29
PRAME-213ENST00000492657 ZNF180Q9UJW8 692 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 HTTP42858 3142 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 GNASQ5JWF2 1037 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 CHSY1Q86X52 802 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 NDUFAF2Q8N183 169 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 ZNF567Q8N184 647 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 SLC2A13Q96QE2 648 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 XAB2Q9HCS7 855 aaKnown RBP13.23□□□□□ -0.29
PRAME-213ENST00000492657 TTC3P53804 2025 aa13.23□□□□□ -0.29
PRAME-213ENST00000492657 FAM237BA0A1B0GVD1 139 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 H3BRJ5 948 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 EEF2KO00418 725 aaKnown RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 CAPN9O14815 690 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 USP12O75317 370 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 PGK1P00558 417 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 CTGFP29279 349 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 ADRA1BP35368 520 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 SCNN1GP51170 649 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 BNIPLQ7Z465 357 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 NAF1Q96HR8 494 aaKnown RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 TMEM120AQ9BXJ8 343 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 MOCS1Q9NZB8 636 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 PSAT1Q9Y617 370 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 ENTPD5O75356 428 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 ATP5HO75947 161 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 CHRNA1P02708 482 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 ERCC2P18074 760 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 EPHB2P29323 1055 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 DPYSQ14117 519 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 C16orf46Q6P387 395 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 C4orf22Q6V702 233 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 DSTYKQ6XUX3 929 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 RFX8Q6ZV50 586 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 TBC1D10AQ9BXI6 508 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
PRAME-213ENST00000492657 SHROOM3Q8TF72 1996 aa13.22□□□□□ -0.29
PRAME-213ENST00000492657 HACD1B0YJ81 288 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 KRT38O76015 456 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 GNAT1P11488 350 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 NCAM1P13591 858 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 SERPINB3P29508 390 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 ZNF157P51786 506 aaPredicted RBP13.21□□□□□ -0.29
PRAME-213ENST00000492657 ARFIP2P53365 341 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 DAOAP59103 153 aa13.21□□□□□ -0.29
PRAME-213ENST00000492657 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms