RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PRDM16Q9HAZ2 1276 aa28.1■■■□□ 2.09
SH3GL3-204ENST00000492099 RXFP3Q9NSD7 469 aa28.1■■■□□ 2.09
SH3GL3-204ENST00000492099 CYP8B1Q9UNU6 501 aa28.1■■■□□ 2.09
SH3GL3-204ENST00000492099 DCDC2BA2VCK2 349 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 F8VZ95 297 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 EPHX1P07099 455 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 POLR2EP19388 210 aaKnown RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 PRKCHP24723 683 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 CCR1P32246 355 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 CD70P32970 193 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 PTGER3P43115 390 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 RPS24P62847 133 aaKnown RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 PITX1P78337 314 aaPredicted RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 MTA1Q13330 715 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 FNDC3BQ53EP0 1204 aaKnown RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 MBLAC2Q68D91 279 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 TCEAL6Q6IPX3 200 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 SYT12Q8IV01 421 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 ZNF397Q8NF99 534 aaPredicted RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 WFDC5Q8TCV5 224 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 TCEAL3Q969E4 200 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 MKRN2Q9H000 416 aaKnown RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 SLC6A17Q9H1V8 727 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 DDIT4Q9NX09 232 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 XPO7Q9UIA9 1087 aaKnown RBP28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 DAAM1Q9Y4D1 1078 aa28.09■■■□□ 2.09
SH3GL3-204ENST00000492099 KCNU1A8MYU2 1149 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 GRAP2O75791 330 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 DLDP09622 509 aaKnown RBP28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 ABCB4P21439 1286 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 IL31Q6EBC2 164 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 ARMCX6Q7L4S7 300 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 CHSY1Q86X52 802 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 TMPRSS6Q8IU80 811 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 LGI2Q8N0V4 545 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 CARNMT1Q8N4J0 409 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 CYB5D2Q8WUJ1 264 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 DDX1Q92499 740 aaKnown RBP28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 RNF34Q969K3 372 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 MYEOVQ96EZ4 313 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 GANQ9H2C0 597 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 TMEM245Q9H330 911 aa28.08■■■□□ 2.09
SH3GL3-204ENST00000492099 DAB1O75553 588 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 LSM8O95777 96 aaKnown RBP28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 TACR2P21452 398 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 NOS2P35228 1153 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 HOXD12P35452 270 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 CDH18Q13634 790 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 STPG1Q5TH74 334 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 RAP1GAP2Q684P5 730 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 PRCCQ92733 491 aaPredicted RBP28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 SIPA1Q96FS4 1042 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 LMLNQ96KR4 655 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 ITM2CQ9NQX7 267 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 RRN3Q9NYV6 651 aa28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 EVLQ9UI08 416 aaPredicted RBP28.07■■■□□ 2.08
SH3GL3-204ENST00000492099 NUP205Q92621 2012 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 F5H5T6 163 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 NDUFS2O75306 463 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 LUC7L3O95232 432 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 GABRB2P47870 512 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 ZNF33AQ06730 810 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 CAMK2GQ13555 558 aaPredicted RBP28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 PTPRNQ16849 979 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 TAF3Q5VWG9 929 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 NOP9Q86U38 636 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 ERICH1Q86X53 443 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 CFAP52Q8N1V2 620 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 TTC17Q96AE7 1141 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 C18orf8Q96DM3 657 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 EDEM2Q9BV94 578 aa28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 USP36Q9P275 1121 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 LIMA1Q9UHB6 759 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-204ENST00000492099 SYNJ2BP-COX16A0A087WUM0 186 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 CD6P30203 668 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 SCNN1AP37088 669 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 MATKP42679 507 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 COPB1P53618 953 aaKnown RBP28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 COPAP53621 1224 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 POLR2FP61218 127 aaKnown RBP28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 LMAN2Q12907 356 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 ZNF677Q86XU0 584 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 MSANTD4Q8NCY6 345 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 OR2T3Q8NH03 318 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 EPS8L1Q8TE68 723 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 FBRSQ9HAH7 460 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 FAM207AQ9NSI2 230 aaPredicted RBP28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 COX16Q9P0S2 106 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 KIAA1522Q9P206 1035 aaPredicted RBP28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 PILRBQ9UKJ0 227 aa28.05■■■□□ 2.08
SH3GL3-204ENST00000492099 LNP1A1A4G5 178 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 LRRC10BA6NIK2 292 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 H0Y626 953 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 ASLP04424 464 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 ACADMP11310 421 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 HLA-EP13747 358 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 CDK11BP21127 795 aaKnown RBP28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 ITPKAP23677 461 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 KLK7P49862 253 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 TTC39BQ5VTQ0 682 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms