RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 USP30Q70CQ3 517 aa15.07■□□□□ 0
SSR4-212ENST00000491833 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
SSR4-212ENST00000491833 KIAA0907Q7Z7F0 614 aaPredicted RBP15.07■□□□□ 0
SSR4-212ENST00000491833 TTC39CQ8N584 583 aa15.07■□□□□ 0
SSR4-212ENST00000491833 GANCQ8TET4 914 aa15.07■□□□□ 0
SSR4-212ENST00000491833 RNF139Q8WU17 664 aa15.07■□□□□ 0
SSR4-212ENST00000491833 BAP1Q92560 729 aa15.07■□□□□ 0
SSR4-212ENST00000491833 TMA16Q96EY4 203 aaKnown RBP15.07■□□□□ 0
SSR4-212ENST00000491833 ULBP1Q9BZM6 244 aa15.07■□□□□ 0
SSR4-212ENST00000491833 PABPC3Q9H361 631 aaKnown RBP15.07■□□□□ 0
SSR4-212ENST00000491833 MMRN2Q9H8L6 949 aa15.07■□□□□ 0
SSR4-212ENST00000491833 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
SSR4-212ENST00000491833 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
SSR4-212ENST00000491833 AK5Q9Y6K8 562 aa15.07■□□□□ 0
SSR4-212ENST00000491833 SHROOM3Q8TF72 1996 aa15.07■□□□□ 0
SSR4-212ENST00000491833 CBX4O00257 560 aa15.06■□□□□ 0
SSR4-212ENST00000491833 SLFN14P0C7P3 912 aa15.06■□□□□ 0
SSR4-212ENST00000491833 KRT13P13646 458 aa15.06■□□□□ 0
SSR4-212ENST00000491833 ACADVLP49748 655 aa15.06■□□□□ 0
SSR4-212ENST00000491833 SFSWAPQ12872 951 aaKnown RBP15.06■□□□□ 0
SSR4-212ENST00000491833 DNAJC3Q13217 504 aa15.06■□□□□ 0
SSR4-212ENST00000491833 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
SSR4-212ENST00000491833 ZC3H3Q8IXZ2 948 aaKnown RBP15.06■□□□□ 0
SSR4-212ENST00000491833 ZNF557Q8N988 423 aaPredicted RBP15.06■□□□□ 0
SSR4-212ENST00000491833 LSM14AQ8ND56 463 aaKnown RBP15.06■□□□□ 0
SSR4-212ENST00000491833 TMEM176AQ96HP8 235 aa15.06■□□□□ 0
SSR4-212ENST00000491833 NRSN2Q9GZP1 204 aa15.06■□□□□ 0
SSR4-212ENST00000491833 RSPH9Q9H1X1 276 aaPredicted RBP15.06■□□□□ 0
SSR4-212ENST00000491833 AASDHPPTQ9NRN7 309 aa15.06■□□□□ 0
SSR4-212ENST00000491833 CAPN9O14815 690 aa15.05■□□□□ -0
SSR4-212ENST00000491833 RNASEH1O60930 286 aaKnown RBP15.05■□□□□ -0
SSR4-212ENST00000491833 NR2F2P24468 414 aa15.05■□□□□ -0
SSR4-212ENST00000491833 EPHA8P29322 1005 aaPredicted RBP15.05■□□□□ -0
SSR4-212ENST00000491833 ST8SIA6P61647 398 aa15.05■□□□□ -0
SSR4-212ENST00000491833 DNM1Q05193 864 aaKnown RBP15.05■□□□□ -0
SSR4-212ENST00000491833 PPP3CAQ08209 521 aa15.05■□□□□ -0
SSR4-212ENST00000491833 TARDBPQ13148 414 aaKnown RBP eCLIP15.05■□□□□ -0
SSR4-212ENST00000491833 PRAMEF14Q5SWL7 426 aa15.05■□□□□ -0
SSR4-212ENST00000491833 ADGRF1Q5T601 910 aa15.05■□□□□ -0
SSR4-212ENST00000491833 RESP18Q5W5W9 173 aa15.05■□□□□ -0
SSR4-212ENST00000491833 ARHGAP17Q68EM7 881 aa15.05■□□□□ -0
SSR4-212ENST00000491833 PM20D1Q6GTS8 502 aa15.05■□□□□ -0
SSR4-212ENST00000491833 NCEH1Q6PIU2 408 aa15.05■□□□□ -0
SSR4-212ENST00000491833 ANKRD52Q8NB46 1076 aa15.05■□□□□ -0
SSR4-212ENST00000491833 SLC4A11Q8NBS3 891 aa15.05■□□□□ -0
SSR4-212ENST00000491833 SNIP1Q8TAD8 396 aaKnown RBP15.05■□□□□ -0
SSR4-212ENST00000491833 WFDC5Q8TCV5 224 aa15.05■□□□□ -0
SSR4-212ENST00000491833 SAP25Q8TEE9 199 aa15.05■□□□□ -0
SSR4-212ENST00000491833 TMEM8AQ9HCN3 771 aa15.05■□□□□ -0
SSR4-212ENST00000491833 GDF3Q9NR23 364 aa15.05■□□□□ -0
SSR4-212ENST00000491833 CISHQ9NSE2 258 aa15.05■□□□□ -0
SSR4-212ENST00000491833 FBXL12Q9NXK8 326 aa15.05■□□□□ -0
SSR4-212ENST00000491833 SFMBT1Q9UHJ3 866 aa15.05■□□□□ -0
SSR4-212ENST00000491833 TRAF3IP3Q9Y228 551 aa15.05■□□□□ -0
SSR4-212ENST00000491833 NYNRINQ9P2P1 1898 aaKnown RBP15.05■□□□□ -0
SSR4-212ENST00000491833 SETXQ7Z333 2677 aaKnown RBP15.04■□□□□ -0
SSR4-212ENST00000491833 KNL1Q8NG31 2342 aa15.04■□□□□ -0
SSR4-212ENST00000491833 A0A1W2PP55 124 aa15.04■□□□□ -0
SSR4-212ENST00000491833 LRRC72A6NJI9 287 aa15.04■□□□□ -0
SSR4-212ENST00000491833 XPO1O14980 1071 aaKnown RBP15.04■□□□□ -0
SSR4-212ENST00000491833 WNT1P04628 370 aa15.04■□□□□ -0
SSR4-212ENST00000491833 PLA2G2AP14555 144 aa15.04■□□□□ -0
SSR4-212ENST00000491833 CD38P28907 300 aa15.04■□□□□ -0
SSR4-212ENST00000491833 CD70P32970 193 aa15.04■□□□□ -0
SSR4-212ENST00000491833 ME1P48163 572 aa15.04■□□□□ -0
SSR4-212ENST00000491833 ARRB1P49407 418 aaPredicted RBP15.04■□□□□ -0
SSR4-212ENST00000491833 SGSHP51688 502 aa15.04■□□□□ -0
SSR4-212ENST00000491833 RAD23BP54727 409 aa15.04■□□□□ -0
SSR4-212ENST00000491833 GALCP54803 685 aa15.04■□□□□ -0
SSR4-212ENST00000491833 ENPEPQ07075 957 aa15.04■□□□□ -0
SSR4-212ENST00000491833 RTP5Q14D33 572 aa15.04■□□□□ -0
SSR4-212ENST00000491833 GOLGA7BQ2TAP0 167 aa15.04■□□□□ -0
SSR4-212ENST00000491833 MPP7Q5T2T1 576 aa15.04■□□□□ -0
SSR4-212ENST00000491833 KRT39Q6A163 491 aa15.04■□□□□ -0
SSR4-212ENST00000491833 FBXL19Q6PCT2 694 aa15.04■□□□□ -0
SSR4-212ENST00000491833 BHLHA9Q7RTU4 235 aa15.04■□□□□ -0
SSR4-212ENST00000491833 MFN1Q8IWA4 741 aa15.04■□□□□ -0
SSR4-212ENST00000491833 FAM186BQ8IYM0 893 aa15.04■□□□□ -0
SSR4-212ENST00000491833 EID2Q8N6I1 236 aa15.04■□□□□ -0
SSR4-212ENST00000491833 OR2T34Q8NGX1 318 aa15.04■□□□□ -0
SSR4-212ENST00000491833 EDEM1Q92611 657 aa15.04■□□□□ -0
SSR4-212ENST00000491833 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
SSR4-212ENST00000491833 SPATA32Q96LK8 384 aa15.04■□□□□ -0
SSR4-212ENST00000491833 IRX2Q9BZI1 471 aaPredicted RBP15.04■□□□□ -0
SSR4-212ENST00000491833 LRRC4Q9HBW1 653 aa15.04■□□□□ -0
SSR4-212ENST00000491833 SERGEFQ9UGK8 458 aa15.04■□□□□ -0
SSR4-212ENST00000491833 SERTAD1Q9UHV2 236 aa15.04■□□□□ -0
SSR4-212ENST00000491833 PCDHA7Q9UN72 937 aa15.04■□□□□ -0
SSR4-212ENST00000491833 HELZ2Q9BYK8 2649 aaKnown RBP15.03■□□□□ -0
SSR4-212ENST00000491833 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
SSR4-212ENST00000491833 MID1O15344 667 aa15.03■□□□□ -0
SSR4-212ENST00000491833 MSI1O43347 362 aaKnown RBP15.03■□□□□ -0
SSR4-212ENST00000491833 ACTN4O43707 911 aaKnown RBP15.03■□□□□ -0
SSR4-212ENST00000491833 TBL1XO60907 577 aa15.03■□□□□ -0
SSR4-212ENST00000491833 SIN3BO75182 1162 aa15.03■□□□□ -0
SSR4-212ENST00000491833 RNASEH2AO75792 299 aaKnown RBP15.03■□□□□ -0
SSR4-212ENST00000491833 ASLP04424 464 aa15.03■□□□□ -0
SSR4-212ENST00000491833 ADIGQ0VDE8 80 aa15.03■□□□□ -0
SSR4-212ENST00000491833 BST2Q10589 180 aaKnown RBP15.03■□□□□ -0
SSR4-212ENST00000491833 SHBQ15464 509 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms