RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 EBF3Q9H4W6 596 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 WNT6Q9Y6F9 365 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 C5orf60A6NFR6 353 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 DAPK3O43293 454 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 THAP12O43422 761 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 TLR5O60602 858 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 SETSIPP0DME0 302 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 RARGP13631 454 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 LCP1P13796 627 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 TUBP50607 506 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 IFFO1Q0D2I5 559 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 PPP2R5EQ16537 467 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 KRT71Q3SY84 523 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 DAAM2Q86T65 1068 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 SLC47A2Q86VL8 602 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 FAM71AQ8IYT1 594 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 WDTC1Q8N5D0 677 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 CLEC4CQ8WTT0 213 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 NEUROG2Q9H2A3 272 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 SLC40A1Q9NP59 571 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 CYLDQ9NQC7 956 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 NOVA2Q9UNW9 492 aaKnown RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 STK25O00506 426 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 GFPT2O94808 682 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 ZBED1O96006 694 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 GLULP15104 373 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 AOC1P19801 751 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 COL9A1P20849 921 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 PDE6CP51160 858 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 SLC8A3P57103 927 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 MAGOHP61326 146 aaKnown RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 PRKCQQ04759 706 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 FZD5Q13467 585 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 STILQ15468 1287 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 TXNDC11Q6PKC3 985 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 CPLX4Q7Z7G2 160 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 HOOK3Q86VS8 718 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 ZNF687Q8N1G0 1237 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 OSCP1Q8WVF1 389 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 MAGOHBQ96A72 148 aaKnown RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 SEC16BQ96JE7 1060 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 KLF16Q9BXK1 252 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 CXorf56Q9H5V9 222 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 LRRC4Q9HBW1 653 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 CFAP97Q9P2B7 532 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 TJP2Q9UDY2 1190 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 TTC7AQ9ULT0 858 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-219ENST00000491747 PIAS3Q9Y6X2 628 aa9.77□□□□□ -0.85
BRCA1-219ENST00000491747 KANSL1LA0AUZ9 987 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 YJEFN3A6XGL0 299 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 E7ENQ6 273 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 F8VZ95 297 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 TTI1O43156 1089 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 DCNP07585 359 aaKnown RBP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 TARSP26639 723 aaKnown RBP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 RPL34P49207 117 aaKnown RBP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 CLCN5P51795 746 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 YWHAGP61981 247 aaKnown RBP eCLIP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 RUNX3Q13761 415 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 SNCBQ16143 134 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 EML3Q32P44 896 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 NT5DC3Q86UY8 548 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 CSGALNACT1Q8TDX6 532 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 HES6Q96HZ4 224 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 NAP1L3Q99457 506 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 FMO2Q99518 471 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 DUS2Q9NX74 493 aaKnown RBP9.76□□□□□ -0.85
BRCA1-219ENST00000491747 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 AMFRQ9UKV5 643 aa9.76□□□□□ -0.85
BRCA1-219ENST00000491747 GOLGA6L10A0A0M3HER8 536 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 GREM1O60565 184 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 IRF1P10914 325 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FERP16591 822 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ATP5C1P36542 298 aaKnown RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 DAOAP59103 153 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ANKRD20A8PQ5CZ79 823 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 NAIF1Q69YI7 327 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CYB5D1Q6P9G0 228 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 PASD1Q8IV76 773 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 PJA1Q8NG27 643 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 GIMAP7Q8NHV1 300 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 RAPGEF5Q92565 580 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SGSM3Q96HU1 749 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 STK33Q9BYT3 514 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 LTB4R2Q9NPC1 389 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 NENFQ9UMX5 172 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FAM170AA1A519 330 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FAM170BA6NMN3 283 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SPECC1L-ADORA2AF8WAN1 911 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 MED7O43513 233 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 PPFIA2O75334 1257 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FLT3P36888 993 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 STAT1P42224 750 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 PSEN1P49768 467 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 KPNA1P52294 538 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms