RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PCDHGA1Q9Y5H4 931 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 KIF26BQ2KJY2 2108 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 GOLGA6L7A0A1B0GV03 622 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 E7ENQ6 273 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 MAPK13O15264 365 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 GABBR2O75899 941 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 ZBED1O96006 694 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 DNTTP04053 509 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 JUPP14923 745 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 SLC6A4P31645 630 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 GALCP54803 685 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 BNIP3Q12983 259 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 RTP5Q14D33 572 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 E2F5Q15329 346 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 ADGRF1Q5T601 910 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 ARHGAP17Q68EM7 881 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 RFWD3Q6PCD5 774 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 NCEH1Q6PIU2 408 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 KANSL1Q7Z3B3 1105 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 ZNF843Q8N446 348 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 ANKRD52Q8NB46 1076 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 EDEM1Q92611 657 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 NXPE2Q96DL1 559 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 PAGE5Q96GU1 130 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 CNDP2Q96KP4 475 aaKnown RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 MRGPRX3Q96LB0 322 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 PABPC3Q9H361 631 aaKnown RBP13.78□□□□□ -0.2
USF1-206ENST00000491629 FBRSQ9HAH7 460 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 CISHQ9NSE2 258 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 TRAF3IP3Q9Y228 551 aa13.78□□□□□ -0.2
USF1-206ENST00000491629 SIN3BO75182 1162 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 RFPL3O75679 317 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 SLFN14P0C7P3 912 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 PIK3R6Q5UE93 754 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 ZNF776Q68DI1 518 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 AHI1Q8N157 1196 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 ARHGAP18Q8N392 663 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 TATDN2Q93075 761 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 TMEM176AQ96HP8 235 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 FCRL3Q96P31 734 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 ACE2Q9BYF1 805 aaPredicted RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
USF1-206ENST00000491629 HBS1LQ9Y450 684 aaKnown RBP13.77□□□□□ -0.21
USF1-206ENST00000491629 A0A1W2PP55 124 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 MID1O15344 667 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 DFNA5O60443 496 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 EPHA8P29322 1005 aaPredicted RBP13.76□□□□□ -0.21
USF1-206ENST00000491629 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
USF1-206ENST00000491629 C21orf59P57076 290 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 TTC31Q49AM3 519 aaPredicted RBP13.76□□□□□ -0.21
USF1-206ENST00000491629 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 C9orf64Q5T6V5 341 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 SFMBT2Q5VUG0 894 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 BSPRYQ5W0U4 402 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 NADSYN1Q6IA69 706 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 SNIP1Q8TAD8 396 aaKnown RBP13.76□□□□□ -0.21
USF1-206ENST00000491629 TTC17Q96AE7 1141 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
USF1-206ENST00000491629 FAM129BQ96TA1 746 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 IMPG2Q9BZV3 1241 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 NRSN2Q9GZP1 204 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 EXOC1Q9NV70 894 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 FBXL12Q9NXK8 326 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 SUN2Q9UH99 717 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 ADAMTS1Q9UHI8 967 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
USF1-206ENST00000491629 XPO1O14980 1071 aaKnown RBP13.75□□□□□ -0.21
USF1-206ENST00000491629 TBL1XO60907 577 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 LATS1O95835 1130 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 C1SP09871 688 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 POLR2EP19388 210 aaKnown RBP13.75□□□□□ -0.21
USF1-206ENST00000491629 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
USF1-206ENST00000491629 NR2F2P24468 414 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 CD38P28907 300 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 HNF1BP35680 557 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 CSKP41240 450 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
USF1-206ENST00000491629 ADIGQ0VDE8 80 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 NFIL3Q16649 462 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
USF1-206ENST00000491629 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
USF1-206ENST00000491629 MMS22LQ6ZRQ5 1243 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms