RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 ASNSP08243 561 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 ACO1P21399 889 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CYP2F1P24903 491 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 ADORA2AP29274 412 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 OLIG2Q13516 323 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 AGKQ53H12 422 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 PITRM1Q5JRX3 1037 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 LDLRAP1Q5SW96 308 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 PRAMEF18Q5VWM3 479 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 COLGALT1Q8NBJ5 622 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TFB1MQ8WVM0 346 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CCDC138Q96M89 665 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 PKP2Q99959 881 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 WDR83Q9BRX9 315 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 ADNPQ9H2P0 1102 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 NOL11Q9H8H0 719 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 MYRFQ9Y2G1 1151 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CHRNGP07510 517 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CXCL8P10145 99 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CKMT2P17540 419 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 GRK2P25098 689 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 MAGEA10P43363 369 aaPredicted RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 EIF2B2P49770 351 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TRAF2Q12933 501 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TEDDM1Q5T9Z0 273 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 ING2Q9H160 280 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 IARS2Q9NSE4 1012 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TEX264Q9Y6I9 313 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 SMCHD1A6NHR9 2005 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 A0A1B0GTW7 788 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 KDM1AO60341 852 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TIPRLO75663 272 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 GJB1P08034 283 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 TSPAN8P19075 237 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 PCSK6P29122 969 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 CAP2P40123 477 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 NOVP48745 357 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 ITGADQ13349 1161 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 DRICH1Q6PGQ1 229 aaPredicted RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 KYAT3Q6YP21 454 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 C12orf29Q8N999 325 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 RNF157Q96PX1 679 aa10.07□□□□□ -0.8
ERCC3-208ENST00000491292 GCOM2Q9BZD3 368 aaPredicted RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 RPAP3Q9H6T3 665 aaPredicted RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 RUVBL2Q9Y230 463 aaKnown RBP10.07□□□□□ -0.8
ERCC3-208ENST00000491292 SLC15A5A6NIM6 579 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CAPN14A8MX76 684 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 C9JVG2 144 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CHADO15335 359 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 DHX15O43143 795 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PLIN3O60664 434 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 DNAJA2O60884 412 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 MICAL2O94851 1124 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 POLBP06746 335 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CRHR1P34998 444 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 SPRP35270 261 aaPredicted RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 GABRB2P47870 512 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ATXN1P54253 815 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PLIN5Q00G26 463 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PTPN11Q06124 597 aaPredicted RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ADGRF2Q8IZF7 708 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 NSUN6Q8TEA1 469 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 LRTOMTQ8WZ04 291 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CNPY3Q9BT09 278 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 COQ10BQ9H8M1 238 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 RMI1Q9H9A7 625 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 UBAP1Q9NZ09 502 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ITGA11Q9UKX5 1188 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 SH3GLB1Q9Y371 365 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 AP4S1Q9Y587 144 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PSAT1Q9Y617 370 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ATP6AP2A0A1C7CYW4 349 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ATP6AP2O75787 350 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 NPR1P16066 1061 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 TGM2P21980 687 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 C21orf59P57076 290 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 STX1BP61266 288 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 NOMO1Q15155 1222 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 XKR5Q6UX68 686 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 ACOT1Q86TX2 421 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 KIAA0319LQ8IZA0 1049 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PLD5Q8N7P1 536 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 IFT43Q96FT9 208 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PLEKHG4BQ96PX9 1271 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 MAGEB5Q9BZ81 275 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 USP29Q9HBJ7 922 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 TRPC7Q9HCX4 862 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 FZD1Q9UP38 647 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 SNX9Q9Y5X1 595 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 DOCK2Q92608 1830 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 J3QRK9 145 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 BUD23O43709 281 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 TRIM13O60858 407 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms