RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 IQCKQ8N0W5 287 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 WBP2Q969T9 261 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 SLC22A12Q96S37 553 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 EPAS1Q99814 870 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 TRPC7Q9HCX4 862 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 ZNF334Q9HCZ1 680 aaPredicted RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 NEU3Q9UQ49 428 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 ZNF840PA6NDX5 716 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 KCNU1A8MYU2 1149 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 DFFAO00273 331 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 LILRB3O75022 631 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 CAPN15O75808 1086 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 PPM1AP35813 382 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 SMARCB1Q12824 385 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 OLIG2Q13516 323 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 MSS51Q4VC12 460 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 RFWD3Q6PCD5 774 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 PSTKQ8IV42 348 aaKnown RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 CFAP52Q8N1V2 620 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 C2orf15Q8WU43 125 aaKnown RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 SLC22A17Q8WUG5 538 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 P2RY11Q96G91 374 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 LBHD1Q9BQE6 289 aaPredicted RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 TXLNGYQ9BZA5 131 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 CDC42EP4Q9H3Q1 356 aaKnown RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 TLR6Q9Y2C9 796 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 INSL5Q9Y5Q6 135 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 MYO16Q9Y6X6 1858 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 PER2O15055 1255 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 COCHO43405 550 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CTSAP10619 480 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 SLCO1A2P46721 670 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 ALFQ53S48 1182 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 SLC45A4Q5BKX6 768 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CEP85LQ5SZL2 805 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 FNBP1LQ5T0N5 605 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 ARTNQ5T4W7 220 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 HEATR6Q6AI08 1181 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 HS6ST3Q8IZP7 471 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 USP33Q8TEY7 942 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 HERVK_113Q902F9 699 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CLP1Q92989 425 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 LRRC45Q96CN5 670 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 SLC39A13Q96H72 371 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 OLFM3Q96PB7 478 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 RBM15Q96T37 977 aaKnown RBP eCLIP14.34□□□□□ -0.112e-7■■■■□ 19.9
SMPD4-219ENST00000491128 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 TRANK1O15050 2925 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 E9PAM4 449 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CA3P07451 260 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 ZFXP17010 805 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 GRIA1P42261 906 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 DNAJC21Q5F1R6 531 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 MS4A13Q5J8X5 152 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 TXNDC8Q6A555 127 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 RBM23Q86U06 439 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CCDC13Q8IYE1 715 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 EIF1ADQ8N9N8 165 aaKnown RBP14.34□□□□□ -0.11
SMPD4-219ENST00000491128 IGSF8Q969P0 613 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 RUFY1Q96T51 708 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 ETNK1Q9HBU6 452 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 SAYSD1Q9NPB0 183 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
SMPD4-219ENST00000491128 TLDC2A0PJX2 215 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 GRM6O15303 877 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 RFPL2O75678 378 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 APRTP07741 180 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 STIP1P31948 543 aaKnown RBP14.33□□□□□ -0.11
SMPD4-219ENST00000491128 BMPR1AP36894 532 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 PBX2P40425 430 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 CYP4F8P98187 520 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 STXBP5Q5T5C0 1151 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 FAM43BQ6ZT52 329 aaPredicted RBP14.33□□□□□ -0.11
SMPD4-219ENST00000491128 BEND5Q7L4P6 421 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 TMEM150AQ86TG1 271 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.11
SMPD4-219ENST00000491128 TRIM62Q9BVG3 475 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.11
SMPD4-219ENST00000491128 TTLL3Q9Y4R7 772 aa14.33□□□□□ -0.11
SMPD4-219ENST00000491128 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 FOXO6A8MYZ6 492 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 H0YGN5 161 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 ZDHHC11BP0C7U3 371 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 AUHQ13825 339 aaKnown RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 SHHQ15465 462 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 BRMS1LQ5PSV4 323 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 TPGS2Q68CL5 300 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 MREGQ8N565 214 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms