RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TACR2P21452 398 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 EPHB2P29323 1055 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 SERPINB6P35237 376 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 VIPR2P41587 438 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 OXCT1P55809 520 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 NRG1Q02297 640 aaPredicted RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 TFDP2Q14188 446 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 MS4A13Q5J8X5 152 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 MFSD6LQ8IWD5 586 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 CPXM2Q8N436 756 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 KIF18AQ8NI77 898 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 CSGALNACT1Q8TDX6 532 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 DDI1Q8WTU0 396 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 MAIP1Q8WWC4 291 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 CD101Q93033 1021 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 PBKQ96KB5 322 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 PEBP4Q96S96 227 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 TRMT61BQ9BVS5 477 aaKnown RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 ZYG11BQ9C0D3 744 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 CARD9Q9H257 536 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 PRKAG3Q9UGI9 489 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 VANGL2Q9ULK5 521 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
VARS2-210ENST00000490699 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
VARS2-210ENST00000490699 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ZNF487B1APH4 448 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ENC1O14682 589 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 TJP3O95049 919 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 KDELR1P24390 212 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 IL1R2P27930 398 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 HCAR3P49019 387 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 CDH18Q13634 790 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 AUHQ13825 339 aaKnown RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 ANO4Q32M45 955 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 Q6ZNB5 142 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 BZW1Q7L1Q6 419 aaKnown RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 RFX6Q8HWS3 928 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ARFGAP1Q8N6T3 406 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ATXN2LQ8WWM7 1075 aaKnown RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 KRT35Q92764 455 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 IRF7Q92985 503 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 FERMT1Q9BQL6 677 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 BRD9Q9H8M2 597 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 PCDH18Q9HCL0 1135 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
VARS2-210ENST00000490699 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 SAR1BQ9Y6B6 198 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 WNT6Q9Y6F9 365 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 NUMBLQ9Y6R0 609 aa11.3□□□□□ -0.6
VARS2-210ENST00000490699 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 GOLGA6L10A0A0M3HER8 536 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 H0Y626 953 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 CES2O00748 559 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 APOL1O14791 398 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 CHADO15335 359 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 ZNF500O60304 480 aaPredicted RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 CEP104O60308 925 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 TSPAN3O60637 253 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 CLDN11O75508 207 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 LRIG2O94898 1065 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 KLKB1P03952 638 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 ATP1A1P05023 1023 aaKnown RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 TCF4P15884 667 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 GDI1P31150 447 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 ETFBP38117 255 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 PAFAH1B1P43034 410 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 PFKPQ01813 784 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 GAD2Q05329 585 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 FCHO2Q0JRZ9 810 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
VARS2-210ENST00000490699 HTR4Q13639 388 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
VARS2-210ENST00000490699 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms