RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 M0QYT0 321 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ITM2AO43736 263 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CHEK2O96017 543 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ITGADQ13349 1161 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 MAPK11Q15759 364 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CDC26Q8NHZ8 85 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 TFAP2BQ92481 460 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 GOLGA4Q13439 2230 aaKnown RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 MYH11P35749 1972 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 KIF1AQ12756 1690 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 JCHAINP01591 159 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ALBP02768 609 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 VDRP11473 427 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 NADK2Q4G0N4 442 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ZFP1Q6P2D0 407 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ARCQ7LC44 396 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CHSY1Q86X52 802 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 OR52K1Q8NGK4 314 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 RSL24D1Q9UHA3 163 aaKnown RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ACOT9Q9Y305 439 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 TSPAN8P19075 237 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 PIK3R1P27986 724 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 NAA20P61599 178 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 POU6F1Q14863 301 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 ATXN3LQ9H3M9 355 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 DDX28Q9NUL7 540 aaKnown RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 DNAAF2Q9NVR5 837 aaKnown RBP13.14□□□□□ -0.31
SHOX2-205ENST00000490689 VANGL2Q9ULK5 521 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 CSADQ9Y600 493 aa13.14□□□□□ -0.31
SHOX2-205ENST00000490689 M0R3G1 203 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 UBDO15205 165 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 INPP4BO15327 924 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PSMB4P28070 264 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 GRIA3P42263 894 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 DAB2P98082 770 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PTP4A2Q12974 167 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 SNX31Q8N9S9 440 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 EML4Q9HC35 981 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ANGPTL3Q9Y5C1 460 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 RGSL1A5PLK6 1076 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 SH3BP5O60239 455 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MPSTP25325 297 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PSMA4P25789 261 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 NFKBIAP25963 317 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 OGDHQ02218 1023 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 GBE1Q04446 702 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 SKA2Q8WVK7 121 aaPredicted RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 TUBGCP3Q96CW5 907 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MAFGO15525 162 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 TIMM44O43615 452 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 AMHP03971 560 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 IL1R2P27930 398 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 GRIA1P42261 906 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 RALGDSQ12967 914 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 FASTKQ14296 549 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ZFAND2BQ8WV99 257 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 NAT9Q9BTE0 207 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MRPS26Q9BYN8 205 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 NACA2Q9H009 215 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ANKRD12Q6UB98 2062 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 MRASO14807 208 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
SHOX2-205ENST00000490689 GABRB2P47870 512 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PRKAA1Q13131 559 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 LPIN1Q14693 890 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 PACS1Q6VY07 963 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
SHOX2-205ENST00000490689 ADGRA2Q96PE1 1338 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 ASS1P00966 412 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms