RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	ERMP1	Q7Z2K6	904 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	DQX1	Q8TE96	717 aa	Known RBP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	RNF139	Q8WU17	664 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	GCNA	Q96QF7	691 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	RAB6C	Q9H0N0	254 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	UXT	Q9UBK9	157 aa	Predicted RBP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	USP18	Q9UMW8	372 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	SMG5	Q9UPR3	1016 aa	Known RBP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	CHAD	O15335	359 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	PRAMEF12	O95522	483 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	RALA	P11233	206 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	RDX	P35241	583 aa	Known RBP	18.83	■□□□□ 0.6
SRM-206	ENST00000490101	PPP3CC	P48454	512 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	DEUP1	Q05D60	604 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	FCHO2	Q0JRZ9	810 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.83	■□□□□ 0.6
SRM-206	ENST00000490101	TXNRD3NB	Q6F5E7	133 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	CREG2	Q8IUH2	290 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	RASGEF1C	Q8N431	466 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	EXD1	Q8NHP7	514 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	TEKT4	Q8WW24	435 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	LRRC3B	Q96PB8	259 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	PEBP4	Q96S96	227 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	SMG9	Q9H0W8	520 aa	Known RBP	18.83	■□□□□ 0.6
SRM-206	ENST00000490101	OLA1	Q9NTK5	396 aa	Known RBP	18.83	■□□□□ 0.6
SRM-206	ENST00000490101	CALCOCO1	Q9P1Z2	691 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	PCSK1N	Q9UHG2	260 aa		18.83	■□□□□ 0.6
SRM-206	ENST00000490101	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.83	■□□□□ 0.6
SRM-206	ENST00000490101	NUP210	Q8TEM1	1887 aa	Predicted RBP	18.82	■□□□□ 0.6
SRM-206	ENST00000490101	ZNF185	O15231	689 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	CEP104	O60308	925 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	LILRB5	O75023	590 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
SRM-206	ENST00000490101	PYGM	P11217	842 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	RARG	P13631	454 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	GBP1	P32455	592 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	ATP13A4	Q4VNC1	1196 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	SCYL2	Q6P3W7	929 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	TAC4	Q86UU9	113 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	RCOR2	Q8IZ40	523 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	NELL1	Q92832	810 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	EPC1	Q9H2F5	836 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	FAM204A	Q9H8W3	233 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	ZWILCH	Q9H900	591 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	RBM12	Q9NTZ6	932 aa	Known RBP	18.82	■□□□□ 0.6
SRM-206	ENST00000490101	PIGV	Q9NUD9	493 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	DDIT4	Q9NX09	232 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	GTSE1	Q9NYZ3	720 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	TRPM5	Q9NZQ8	1165 aa		18.82	■□□□□ 0.6
SRM-206	ENST00000490101	ZNF840P	A6NDX5	716 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	MDM4	O15151	490 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	RARA	P10276	462 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	CHRNB1	P11230	501 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	CDC25C	P30307	473 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	CXCR3	P49682	368 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	CCR3	P51677	355 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	SATB1	Q01826	763 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	PPP2R5D	Q14738	602 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	LPAL2	Q16609	132 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	TXNDC11	Q6PKC3	985 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	RSRC2	Q7L4I2	434 aa	Known RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	DGLUCY	Q7Z3D6	616 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	PSTK	Q8IV42	348 aa	Known RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	ACTRT1	Q8TDG2	376 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	RBM41	Q96IZ5	413 aa	Known RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	CDK5RAP1	Q96SZ6	601 aa	Known RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	IER2	Q9BTL4	223 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	FAM126A	Q9BYI3	521 aa	Predicted RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	TASP1	Q9H6P5	420 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	C8orf33	Q9H7E9	229 aa	Predicted RBP	18.81	■□□□□ 0.6
SRM-206	ENST00000490101	IL21	Q9HBE4	155 aa		18.81	■□□□□ 0.6
SRM-206	ENST00000490101	NCOR2	Q9Y618	2525 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	SPECC1L-ADORA2A	F8WAN1	911 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	IRAK2	O43187	625 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	F11	P03951	625 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	KRT1	P04264	644 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	TDGF1	P13385	188 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	GJC1	P36383	396 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	TUB	P50607	506 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	ATXN1	P54253	815 aa	Known RBP	18.8	■□□□□ 0.6
SRM-206	ENST00000490101	NRL	P54845	237 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	AIF1	P55008	147 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	COPS2	P61201	443 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	TNK2	Q07912	1038 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	NME3	Q13232	169 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	ZNF211	Q13398	564 aa	Predicted RBP	18.8	■□□□□ 0.6
SRM-206	ENST00000490101	NNT	Q13423	1086 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	LRRC32	Q14392	662 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	GAS6	Q14393	721 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	ERMARD	Q5T6L9	678 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	SEL1L2	Q5TEA6	688 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
SRM-206	ENST00000490101	FAM131B	Q86XD5	332 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	ADAM32	Q8TC27	787 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	BPIFB1	Q8TDL5	484 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	NTAN1	Q96AB6	310 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	MSANTD3	Q96H12	275 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	CAPZA3	Q96KX2	299 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms