RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 FBXO28Q9NVF7 368 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 CHPF2Q9P2E5 772 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 PCDHB7Q9Y5E2 793 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 ANO9A1A5B4 782 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 RASA4BC9J798 803 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 RASA4O43374 803 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 ZC3H11AO75152 810 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 KAT7O95251 611 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 NTSR2O95665 410 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 GLP2RO95838 553 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 EEF1GP26641 437 aaKnown RBP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 CDKN2AP42771 156 aaKnown RBP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 PGGT1BP53609 377 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 UBAP2Q5T6F2 1119 aaKnown RBP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 ARL6IP4Q66PJ3 421 aaKnown RBP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 B4GALNT4Q76KP1 1039 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 TRAPPC11Q7Z392 1133 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 TTC30AQ86WT1 665 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 PAQR4Q8N4S7 273 aaPredicted RBP4.33□□□□□ -1.72
HMGN1-218ENST00000490032 EXD3Q8N9H8 876 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 SLC22A17Q8WUG5 538 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 EME1Q96AY2 570 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 FAR2Q96K12 515 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 HTATIP2Q9BUP3 242 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 PRDM16Q9HAZ2 1276 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 TM7SF3Q9NS93 570 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 NOTCH4Q99466 2003 aa4.33□□□□□ -1.72
HMGN1-218ENST00000490032 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 PNMA6EA0A0J9YXQ4 647 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 PCDH17O14917 1159 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 HNRNPDLO14979 420 aaKnown RBP4.32□□□□□ -1.72
HMGN1-218ENST00000490032 NKX2-8O15522 239 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 CNTN5O94779 1100 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 IGFBP2P18065 325 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 TGM2P21980 687 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 SLC37A1P57057 533 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 PTGR1Q14914 329 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 ODF3L2Q3SX64 289 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 C6orf10Q5SRN2 563 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 WDR93Q6P2C0 686 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 SLC39A5Q6ZMH5 540 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
HMGN1-218ENST00000490032 RIPOR3Q96MK2 946 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 ZNF347Q96SE7 839 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 ABHD14AQ9BUJ0 271 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 MRPL44Q9H9J2 332 aaKnown RBP4.32□□□□□ -1.72
HMGN1-218ENST00000490032 UTS2RQ9UKP6 389 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 LAMP3Q9UQV4 416 aa4.32□□□□□ -1.72
HMGN1-218ENST00000490032 A6NNC1 897 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 GTPBP1O00178 669 aaKnown RBP4.31□□□□□ -1.72
HMGN1-218ENST00000490032 PODXLO00592 558 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 IFNA2P01563 188 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 P2RX3P56373 397 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 RAB30Q15771 203 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 AAK1Q2M2I8 961 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 IZUMO3Q5VZ72 239 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 LRIG3Q6UXM1 1119 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 TMEM199Q8N511 208 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 ZNF566Q969W8 418 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 THOC3Q96J01 351 aaKnown RBP4.31□□□□□ -1.72
HMGN1-218ENST00000490032 SPAG4Q9NPE6 437 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 SLC52A1Q9NWF4 448 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 WWOXQ9NZC7 414 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 ANAPC4Q9UJX5 808 aa4.31□□□□□ -1.72
HMGN1-218ENST00000490032 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 ANXA6P08133 673 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 MYL3P08590 195 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 T-ENOLP0DO92 83 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 CHRNB1P11230 501 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 ARRB2P32121 409 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 HSPA7P48741 367 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 TLE3Q04726 772 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 PPATQ06203 517 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 GRM4Q14833 912 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 MPEG1Q2M385 716 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 CCAR1Q8IX12 1150 aaKnown RBP4.3□□□□□ -1.72
HMGN1-218ENST00000490032 ADGRF3Q8IZF5 1079 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 ADPRHL1Q8NDY3 354 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 ASB5Q8WWX0 329 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 IL21RQ9HBE5 538 aa4.3□□□□□ -1.72
HMGN1-218ENST00000490032 CNTNAP2Q9UHC6 1331 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 C3orf70A6NLC5 250 aaPredicted RBP4.29□□□□□ -1.72
HMGN1-218ENST00000490032 PRR23D1E9PI22 279 aaPredicted RBP4.29□□□□□ -1.72
HMGN1-218ENST00000490032 RHODO00212 210 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
HMGN1-218ENST00000490032 PLA2G6O60733 806 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 CER1O95813 267 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 PRR23D2P0DMB1 279 aaPredicted RBP4.29□□□□□ -1.72
HMGN1-218ENST00000490032 LONRF1Q17RB8 773 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TTC39AQ5SRH9 613 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TRABD2AQ86V40 505 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms