RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CDONQ4KMG0 1287 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 METTL24Q5JXM2 366 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PPM1LQ5SGD2 360 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NXNQ6DKJ4 435 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KRT80Q6KB66 452 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KIAA1841Q6NSI8 718 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GJB7Q6PEY0 223 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TUBA3EQ6PEY2 450 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KIF6Q6ZMV9 814 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DEFB132Q7Z7B7 95 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 IGFN1Q86VF2 1251 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HPS6Q86YV9 775 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 COLGALT2Q8IYK4 626 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DEFB107AQ8IZN7 70 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NATD1Q8N6N6 113 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TOR1AIP2Q8NFQ8 470 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SHKBP1Q8TBC3 707 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ETNPPLQ8TBG4 499 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KBTBD7Q8WVZ9 684 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DLG3Q92796 817 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TANKQ92844 425 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 E2F7Q96AV8 911 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 RMDN1Q96DB5 314 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ZNF597Q96LX8 424 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ZNF512Q96ME7 567 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MTMR9Q96QG7 549 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TUBA1CQ9BQE3 449 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SHCBP1LQ9BZQ2 653 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PGPEP1Q9NXJ5 209 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GCNT4Q9P109 453 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 STK39Q9UEW8 545 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 VPS28Q9UK41 221 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KIAA1257Q9ULG3 409 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 C1orf232A0A0U1RR37 186 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 IQANK1A0A1B0GTG1 560 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 A0A1B0GTW7 788 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 A0A1W2PPW3 197 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ARHGEF35A5YM69 484 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MEI4A8MW99 385 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FADS2P1A8MWK0 482 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MINDY4BA8MYZ0 360 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM155AB1AL88 458 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 E5RJQ4 531 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PDXKO00764 312 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DNALI1O14645 258 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DYNC1LI2O43237 492 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC26A4O43511 780 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CLPXO76031 633 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 BCL10O95999 233 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ALDH1A1P00352 501 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PCSK2P16519 638 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ATF3P18847 181 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ITGAXP20702 1163 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TGM1P22735 817 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GRNP28799 593 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 POLR2BP30876 1174 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 BTDP43251 543 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GPD2P43304 727 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CLK3P49761 638 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 IDH3AP50213 366 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TMBIM6P55061 237 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TPTEP56180 551 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FAAP100Q0VG06 881 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 UBAP2LQ14157 1087 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MORF4L2Q15014 288 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TAF1CQ15572 869 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CRY1Q16526 586 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ARHGAP44Q17R89 818 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KNOP1Q1ED39 458 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MGAT5BQ3V5L5 792 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FGD3Q5JSP0 725 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 AARS2Q5JTZ9 985 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 C6orf10Q5SRN2 563 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 WDR78Q5VTH9 848 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CIAPIN1Q6FI81 312 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PPP1R2P3Q6NXS1 205 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PRR23CQ6ZRP0 262 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 LINC00299Q6ZSB3 139 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SH2D5Q6ZV89 423 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CYP4V2Q6ZWL3 525 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TAS2R42Q7RTR8 314 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NEK8Q86SG6 692 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 OSTM1Q86WC4 334 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KSR1Q8IVT5 923 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KIAA2013Q8IYS2 634 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HACE1Q8IYU2 909 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC38A6Q8IZM9 456 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SPARTQ8N0X7 666 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 LCORLQ8N3X6 602 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TTC30BQ8N4P2 665 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TTC16Q8NEE8 873 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TNIP2Q8NFZ5 429 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GRIN3AQ8TCU5 1115 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TTC9Q92623 222 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC5A5Q92911 643 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC35C1Q96A29 364 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TTC17Q96AE7 1141 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ACDQ96AP0 544 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms