RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 M0QYT0 321 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 MEN1O00255 615 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 EEF2KO00418 725 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 POMCP01189 267 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 FBXO45P0C2W1 286 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 NCAM1P13591 858 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TPSB2P20231 275 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 IL1R2P27930 398 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CCR1P32246 355 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 STX2P32856 288 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 GPC1P35052 558 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 ADRA1BP35368 520 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 GRIK1P39086 918 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 MAGEA6P43360 314 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PPP3CCP48454 512 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TUFMP49411 452 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 GLUD2P49448 558 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CXCR3P49682 368 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 MAP3K7CLP57077 242 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 DMTNQ08495 405 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 IKBKEQ14164 716 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PPP2R5DQ14738 602 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PAFAH1B3Q15102 231 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TPSAB1Q15661 275 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CDO1Q16878 200 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC38Q502W7 563 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PPP6R3Q5H9R7 873 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 KCNT1Q5JUK3 1230 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TMCO4Q5TGY1 634 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 NUGGCQ68CJ6 796 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 AADACL2Q6P093 401 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGEF18Q6ZSZ5 1173 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CYP2U1Q7Z449 544 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 BNIPLQ7Z465 357 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PALM2Q8IXS6 379 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 FAM126BQ8IXS8 530 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 COLGALT2Q8IYK4 626 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 ZNF276Q8N554 614 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 SLC7A14Q8TBB6 771 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 RNF139Q8WU17 664 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 PIK3R5Q8WYR1 880 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 OVCA2Q8WZ82 227 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TLCD1Q96CP7 247 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 SPATA17Q96L03 361 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 QKIQ96PU8 341 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CSPG4P5Q96PW8 444 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CYTH2Q99418 400 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TMEM121Q9BTD3 319 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 NSRP1Q9H0G5 558 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 TTYH1Q9H313 450 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CDC42EP4Q9H3Q1 356 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 SSU72Q9NP77 194 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CRTAC1Q9NQ79 661 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 NKIRAS1Q9NYS0 192 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 CLIC5Q9NZA1 410 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 LGALS13Q9UHV8 139 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 GGA2Q9UJY4 613 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 FBXW11Q9UKB1 542 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 SMG5Q9UPR3 1016 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
SF3A3-208ENST00000489537 R3HDM2Q9Y2K5 976 aaKnown RBP6.57□□□□□ -1.36
SF3A3-208ENST00000489537 A0A0A0MRY4 1105 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 IQANK1A0A1B0GTG1 560 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 ABHD14A-ACY1A0A1B0GW23 586 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 EXOC1LA0A1B0GW35 172 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 MAGEB16A2A368 324 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 E7ESA3 106 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 ENPP3O14638 875 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 MGEA5O60502 916 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 PQBP1O60828 265 aaKnown RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 GRAP2O75791 330 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 GJB6O95452 261 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 APOEP02649 317 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 CXCL10P02778 98 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 SRGAP2BP0DMP2 458 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 CNTFP26441 200 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 PPM1AP35813 382 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 MDH1P40925 334 aaKnown RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 OR1G1P47890 313 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 ALDH7A1P49419 539 aaKnown RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 TPI1P60174 286 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 DYNLT1P63172 113 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 BASP1P80723 227 aaKnown RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 MRPS25P82663 173 aaKnown RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 ADCY1Q08828 1119 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 NAB1Q13506 487 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 LAMB3Q13751 1172 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 PRPSAP1Q14558 356 aa6.56□□□□□ -1.36
SF3A3-208ENST00000489537 UAP1Q16222 522 aaPredicted RBP6.56□□□□□ -1.36
SF3A3-208ENST00000489537 PARP6Q2NL67 630 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms